Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 NCOR1P1-202ENST00000486162 291 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 PRELID3BP4-201ENST00000515476 571 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 RNU6-488P-201ENST00000515918 99 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 RN7SKP116-201ENST00000516902 319 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 RN7SKP289-201ENST00000517244 295 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 IGJP1-201ENST00000522682 475 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AC104115.2-201ENST00000523026 687 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AC005476.1-201ENST00000554427 397 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AC010735.1-201ENST00000567305 1026 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AC023824.3-201ENST00000569003 562 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 MIR5680-201ENST00000577577 84 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 MIR4760-201ENST00000585040 80 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 RN7SL622P-201ENST00000585292 275 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 CKS1BP3-201ENST00000600888 237 ntBASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLIP2Q9UDT6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLIP2Q9UDT6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.9□□□□□ -1.78
CLIP2Q9UDT6 AC004972.1-201ENST00000623934 2209 ntBASIC3.9□□□□□ -1.78
CLIP2Q9UDT6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
CLIP2Q9UDT6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.9□□□□□ -1.78
CLIP2Q9UDT6 AC007496.3-201ENST00000624987 3443 ntBASIC3.9□□□□□ -1.78
CLIP2Q9UDT6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 RNU6-805P-201ENST00000365643 106 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 RNU6-932P-201ENST00000391108 106 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 RPL31P2-201ENST00000413849 377 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 GTF2IP23-201ENST00000423746 351 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 MTCYBP32-201ENST00000427945 1084 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 HMGB1P45-201ENST00000435986 653 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 RPS26P56-201ENST00000444468 240 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 RPL12P22-201ENST00000519073 490 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 ZNF415P1-201ENST00000582279 1166 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AP002906.1-201ENST00000603405 233 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AC084824.5-201ENST00000612009 413 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 U73479.1-201ENST00000618062 168 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AL356321.1-201ENST00000621360 228 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 AC009269.6-201ENST00000621778 588 ntBASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CLIP2Q9UDT6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AL672296.1-201ENST00000427780 2158 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 SNORA51.2-201ENST00000364595 132 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 DSTNP4-201ENST00000399472 474 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AL357075.1-201ENST00000404107 726 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 RNA5SP293-201ENST00000410527 113 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AL009174.1-201ENST00000426577 416 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 YWHAZP8-201ENST00000436935 731 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AL096829.2-201ENST00000446582 742 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC008264.1-201ENST00000447612 367 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC125238.1-201ENST00000448842 249 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC115115.1-201ENST00000449927 248 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 RN7SL504P-201ENST00000494496 287 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 TXNP6-201ENST00000510190 310 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC010374.2-201ENST00000512933 535 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC016065.2-201ENST00000514530 444 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 RNU6-334P-201ENST00000517072 102 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 HIGD1AP6-201ENST00000521833 279 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 HMGB1P1-201ENST00000522557 636 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 OR4R2P-201ENST00000530815 597 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms