Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL158050.1-201ENST00000416077 457 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 HSPE1P1-201ENST00000421494 318 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 SNRPEP4-201ENST00000435815 279 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC008264.1-201ENST00000447612 367 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 RPL7P59-201ENST00000447700 943 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC233982.1-201ENST00000451247 436 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 RPL23AP67-201ENST00000465341 474 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 RN7SL504P-201ENST00000494496 287 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 COL6A4P2-205ENST00000509855 506 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC107934.2-201ENST00000518653 310 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC083923.1-201ENST00000523708 376 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 OR8K2P-201ENST00000524645 927 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC104229.1-201ENST00000561364 255 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 MIR5680-201ENST00000577577 84 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 CKS1BP3-201ENST00000600888 237 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AC091488.1-201ENST00000604239 660 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 YPEL5P2-201ENST00000605553 359 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 AL445493.3-201ENST00000619568 477 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSFQ9UBX1 ZNF734P-201ENST00000419494 1534 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 CR383658.2-201ENST00000547576 1525 ntBASIC3.13□□□□□ -1.91
CTSFQ9UBX1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 MIR23A-201ENST00000385245 73 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC019070.1-201ENST00000415008 1024 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 MTCO3P12-201ENST00000416718 547 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 OFD1P18Y-201ENST00000420889 959 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AL158071.1-201ENST00000430315 461 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 OR2B8P-201ENST00000432841 938 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 BX679664.1-201ENST00000434429 253 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC140076.1-201ENST00000449897 361 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 snoU13.4-201ENST00000458916 104 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC008565.1-201ENST00000509046 885 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 MTCYBP37-201ENST00000510642 1133 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 CR383656.14-201ENST00000551951 406 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 TGIF1P1-201ENST00000558095 802 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC106734.1-201ENST00000568646 663 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 SNORD84-203ENST00000584275 78 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC113368.1-201ENST00000603736 382 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC073387.2-201ENST00000604797 784 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC009464.1-201ENST00000615731 469 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 FRG1HP-204ENST00000617940 757 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 AC018926.3-201ENST00000618841 406 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTSFQ9UBX1 MFSD8-213ENST00000641134 1327 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 FAM35CP-201ENST00000554755 2470 ntBASIC3.12□□□□□ -1.91
CTSFQ9UBX1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC058791.1-201ENST00000608412 3198 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC016716.1-201ENST00000265882 708 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 ENSAP3-201ENST00000312710 333 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RNU1-70P-201ENST00000362618 164 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RNU6-55P-201ENST00000411092 107 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RNU6-954P-201ENST00000411355 107 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 GTF2IP23-201ENST00000423746 351 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms