Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC044913.1-201ENST00000557200 430 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC022146.1-201ENST00000595307 847 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 YPEL5P2-201ENST00000605553 359 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 MIR7112-201ENST00000616126 65 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCF1Q9UBD9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CLCF1Q9UBD9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC117529.2-201ENST00000512159 2068 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 OSBPL9P4-201ENST00000371707 1800 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCF1Q9UBD9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AL513302.2-201ENST00000562313 1842 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 RNU6-839P-201ENST00000363347 108 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 SNORD116-23-201ENST00000384645 92 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 TAF9BP1-201ENST00000396646 746 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 BTF3P8-201ENST00000414577 526 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 MTCYBP32-201ENST00000427945 1084 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 RPL23AP62-201ENST00000463396 453 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC004801.2-202ENST00000463559 283 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 ACTG1P13-201ENST00000486987 1043 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 RPL7P38-201ENST00000488396 739 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC069306.1-201ENST00000507006 843 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 APOOP4-201ENST00000513530 597 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 SNORA74D-201ENST00000516404 141 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 ARL2BPP5-201ENST00000523141 481 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC087897.1-201ENST00000550134 156 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 LSM6P2-201ENST00000552208 177 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC093519.1-201ENST00000566109 298 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 MIR3200-201ENST00000580767 85 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC090616.5-202ENST00000582111 297 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 CKS1BP3-201ENST00000600888 237 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AP003973.1-201ENST00000604639 691 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC005014.3-201ENST00000605985 190 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AL513477.2-201ENST00000607858 568 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AP005137.2-201ENST00000609238 400 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AL592295.2-201ENST00000612578 206 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 RNVU1-4-201ENST00000612985 164 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AL354976.1-201ENST00000613843 387 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC010872.1-201ENST00000624225 675 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AL512506.2-201ENST00000624472 458 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC138649.5-201ENST00000637456 137 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 AL359893.1-201ENST00000447628 1580 ntBASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCF1Q9UBD9 ZNF734P-201ENST00000419494 1534 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 ANKRD36P1-201ENST00000344424 659 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 RNU6-582P-201ENST00000362989 107 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 MIR483-201ENST00000385070 76 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 RNU6-1000P-201ENST00000391066 106 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 OFD1P18Y-201ENST00000420889 959 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AL049610.1-201ENST00000423374 372 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms