Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 USP9YP24-201ENST00000434374 697 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 USP9YP17-201ENST00000444617 696 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 RPS29P31-201ENST00000446147 164 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 RPL7P47-201ENST00000497299 556 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AP006245.1-201ENST00000522549 120 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC090502.2-201ENST00000549267 280 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC125611.1-201ENST00000549563 229 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC138915.2-201ENST00000569776 97 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 MTCO2P2-201ENST00000591258 225 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 BNIP3P33-201ENST00000598912 569 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC016877.3-201ENST00000606778 504 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC231759.1-201ENST00000616455 597 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC009318.4-201ENST00000620496 486 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 U4.6-201ENST00000621618 127 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC073348.1-201ENST00000623002 331 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC012442.3-202ENST00000636742 206 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 RNA5SP235-201ENST00000365411 114 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 SNORD6-201ENST00000365444 73 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 RNU6-413P-201ENST00000384115 107 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 MT-TC-201ENST00000387405 66 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 RNU4-22P-201ENST00000411058 166 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC017079.2-201ENST00000416102 485 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 GTF2IP23-201ENST00000423746 351 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 NANOGP5-201ENST00000424456 877 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 EEF1A1P39-201ENST00000440791 250 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC007327.1-201ENST00000447461 264 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 PABPC1P3-201ENST00000469174 459 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AL136126.1-201ENST00000473603 402 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 RPL21P129-201ENST00000491732 478 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AP002812.1-201ENST00000495378 474 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC107954.1-201ENST00000565906 727 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 MIR4738-201ENST00000579134 87 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AL669831.4-202ENST00000590817 238 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC020914.6-201ENST00000594327 272 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC010591.1-201ENST00000603941 649 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC025588.3-201ENST00000604182 274 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AC245389.1-201ENST00000605141 529 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AP003355.3-201ENST00000623465 114 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 AL353746.1-201ENST00000566293 6881 ntBASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMC4Q9NTJ3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC107982.1-201ENST00000507171 1300 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 Y_RNA.25-201ENST00000362528 102 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AL356320.2-201ENST00000417263 507 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC244098.2-201ENST00000422068 99 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AL513175.2-201ENST00000422071 443 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC006548.1-201ENST00000427470 102 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 USP9YP31-201ENST00000431405 881 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC073387.1-201ENST00000453261 709 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AL136097.1-201ENST00000456945 913 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC011979.1-201ENST00000472300 483 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 SYPL1P1-201ENST00000473622 768 ntBASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.54□□□□□ -1.68
SMC4Q9NTJ3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms