Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 NPM1P13-201ENST00000452663 865 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 VN1R104P-201ENST00000505115 1009 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 AC093755.1-201ENST00000512950 1023 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 SNORD116-30-201ENST00000516468 85 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 HSPE1P20-201ENST00000538133 289 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 RPL23AP92-201ENST00000603609 255 ntBASIC3.08□□□□□ -1.92
TRIM4Q9C037 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM4Q9C037 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM4Q9C037 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM4Q9C037 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM4Q9C037 AL445529.1-201ENST00000398713 389 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 AL035407.1-201ENST00000429211 571 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 AL121890.1-201ENST00000435457 205 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 AL031663.1-201ENST00000437445 219 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 Z99127.3-201ENST00000448158 395 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 BUD31P2-201ENST00000449374 300 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 TRBV12-1-201ENST00000479785 344 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 AC110792.2-201ENST00000510278 224 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 RNU6-237P-201ENST00000515985 71 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 RN7SKP116-201ENST00000516902 319 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 RN7SKP234-201ENST00000517173 224 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 COX6B1P6-201ENST00000522347 255 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 EIF4EP5-201ENST00000528228 640 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 AC073657.2-201ENST00000605661 303 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM4Q9C037 FAM35BP-202ENST00000497389 3337 ntBASIC3.07□□□□□ -1.92
TRIM4Q9C037 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 AL161431.1-201ENST00000618966 4205 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM4Q9C037 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM4Q9C037 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM4Q9C037 ZNF33CP-201ENST00000432492 2030 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 MTND2P8-201ENST00000450555 1025 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 TPMTP4-201ENST00000450749 678 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM4Q9C037 VN1R17P-201ENST00000472048 1090 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 RN7SKP43-201ENST00000516173 320 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 RNU6-826P-201ENST00000516827 104 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 AC015917.1-201ENST00000579654 510 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 AC115085.1-201ENST00000588924 229 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 AP000787.2-201ENST00000604432 568 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 AL356490.1-201ENST00000623079 479 ntBASIC3.06□□□□□ -1.92
TRIM4Q9C037 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TRIM4Q9C037 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM4Q9C037 OR56A5-201ENST00000340110 738 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 RNU4-82P-201ENST00000362443 140 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 MIR181B1-201ENST00000385240 110 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM4Q9C037 RNA5SP498-201ENST00000411342 120 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 HMGN1P24-201ENST00000412282 298 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 CST9LP2-201ENST00000437612 320 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 AC000041.1-201ENST00000439655 175 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 ARL5AP2-201ENST00000444698 533 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 RPL31P20-201ENST00000449593 360 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 RPL31P50-201ENST00000471002 296 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 SNORD59.2-201ENST00000516873 68 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 OR4A45P-201ENST00000529954 901 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 AP002404.1-201ENST00000532005 451 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 GTF3AP2-201ENST00000557014 266 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 AC100793.4-201ENST00000613683 429 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 AC009464.1-201ENST00000615731 469 ntBASIC3.05□□□□□ -1.92
TRIM4Q9C037 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM4Q9C037 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM4Q9C037 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms