Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC114774.1-201ENST00000507410 1770 ntBASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 AP000560.1-201ENST00000624150 1937 ntBASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP4-3Q9BYR4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC011455.2-201ENST00000599320 3336 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU1-150P-201ENST00000362491 162 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-626P-201ENST00000363354 107 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNA5SP500-201ENST00000364486 119 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.275-201ENST00000364726 110 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.313-201ENST00000365095 103 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-497P-201ENST00000365316 104 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU4-48P-201ENST00000365559 182 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RN7SKP81-201ENST00000365603 331 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-102P-201ENST00000384485 104 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.565-201ENST00000384719 101 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.584-201ENST00000391090 114 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-903P-201ENST00000391270 109 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RPS20P2-201ENST00000402520 389 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 LAP3P1-201ENST00000403648 294 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR1203-201ENST00000408812 85 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU2-17P-201ENST00000410290 190 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.602-201ENST00000410535 92 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC079809.1-201ENST00000415468 276 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RPL35AP31-201ENST00000418340 337 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 CHEK2P5-201ENST00000423877 246 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC016027.5-201ENST00000427227 210 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AP000907.1-201ENST00000428428 510 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 BMS1P19-201ENST00000433925 393 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AL451136.1-201ENST00000435399 325 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC005002.2-201ENST00000438228 269 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RPS12P17-201ENST00000438591 377 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 CYCSP51-201ENST00000443545 318 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AL161636.2-201ENST00000445179 927 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC239809.1-201ENST00000450470 217 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AP006222.1-205ENST00000450734 457 ntBASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.06□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU7-180P-201ENST00000459240 63 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms