Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC008945.2-201ENST00000606056 604 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AL022401.1-201ENST00000619498 108 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 AC006378.2-201ENST00000623178 2476 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN3Q9BTN0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC004817.4-201ENST00000602396 3625 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 RNU1-132P-201ENST00000364300 164 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 MIR218-2-201ENST00000385006 110 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 MT-TC-201ENST00000387405 66 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 USP9YP6-201ENST00000413550 854 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 RPL31P45-201ENST00000419532 356 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC109583.1-201ENST00000432156 268 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL500522.2-201ENST00000448562 343 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 OR6K1P-201ENST00000456766 971 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AMD1P1-201ENST00000457220 922 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 RPL37P6-202ENST00000464216 403 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC146507.1-201ENST00000468335 354 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL121769.1-201ENST00000469473 401 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 RPL21P103-201ENST00000479921 488 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AP001025.2-201ENST00000490908 477 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC098799.2-201ENST00000509466 868 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC034159.1-201ENST00000513885 583 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AP000827.1-201ENST00000527814 258 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL049839.1-201ENST00000556151 657 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 MIR544B-201ENST00000582372 78 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL121932.1-201ENST00000605542 214 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL049794.2-201ENST00000616301 365 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 SCARNA15.3-201ENST00000626315 122 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL157786.1-207ENST00000627771 695 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 SCARNA4.1-201ENST00000628597 123 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC079097.1-201ENST00000512187 1399 ntBASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN3Q9BTN0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 RNA5SP22-201ENST00000365393 109 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 RNU1-82P-201ENST00000390851 165 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AL645608.4-201ENST00000423619 154 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 PSMA6P3-201ENST00000428242 164 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AL590233.1-201ENST00000430017 456 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 MTND3P21-201ENST00000433774 331 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 MTND1P28-201ENST00000435623 950 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC127537.2-201ENST00000439258 465 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms