Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 RPS23P10-201ENST00000416185 486 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 CYCSP10-201ENST00000417973 294 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 ZNF885P-201ENST00000420174 1098 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 MTCO1P19-201ENST00000443487 500 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC005297.2-201ENST00000450430 606 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AL445669.2-201ENST00000454425 421 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC091564.1-201ENST00000464563 479 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC021678.1-201ENST00000505195 936 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC109458.1-201ENST00000508858 316 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AF131216.2-201ENST00000512316 564 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 RNU6-352P-201ENST00000516908 107 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 RFPL1S-203ENST00000539579 330 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC012213.3-201ENST00000577199 777 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 OR4G1P-201ENST00000588632 938 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 RPL23AP92-201ENST00000603609 255 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AL592436.1-201ENST00000605135 558 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC097468.3-201ENST00000607956 456 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC092656.1-203ENST00000624134 423 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC112200.1-201ENST00000625015 234 ntBASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PAAF1Q9BRP4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
PAAF1Q9BRP4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.34□□□□□ -1.72
PAAF1Q9BRP4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PAAF1Q9BRP4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 RNU5F-6P-201ENST00000362979 116 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 SNORD35B-201ENST00000363660 87 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 RNU6-777P-201ENST00000364265 104 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 SNORD116-4-201ENST00000384733 96 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 RPL31P1-201ENST00000398116 372 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AL138880.1-201ENST00000405824 642 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 RPL17P12-201ENST00000413391 526 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 MTATP6P27-201ENST00000416987 621 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 DLGAP5P1-201ENST00000430307 464 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 RPL37P21-201ENST00000435890 276 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 RPL36AP13-201ENST00000457490 317 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 RPL37P6-202ENST00000464216 403 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC022034.3-201ENST00000471393 478 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC004069.2-201ENST00000505438 1114 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC025881.1-201ENST00000518851 512 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC024224.1-201ENST00000538284 609 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 OR6C7P-201ENST00000547875 934 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AL161713.1-201ENST00000555538 145 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC012414.6-201ENST00000568241 401 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 MIR5685-201ENST00000579080 79 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC012417.1-201ENST00000582307 1039 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC083760.1-201ENST00000589621 670 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC112187.2-201ENST00000604345 283 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC090186.1-201ENST00000605991 572 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AL008729.2-201ENST00000606393 473 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC090116.1-201ENST00000615679 446 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC039056.2-201ENST00000622261 511 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC034229.5-201ENST00000624258 185 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms