Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AP006248.2-201ENST00000623309 592 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 AC112484.5-201ENST00000624189 228 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP88Q99567 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP88Q99567 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP88Q99567 AL133243.3-201ENST00000617415 3004 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
NUP88Q99567 AC027290.2-201ENST00000623210 18662 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP88Q99567 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP88Q99567 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP88Q99567 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP88Q99567 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP88Q99567 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP88Q99567 PABPC1P7-201ENST00000413177 1513 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUP88Q99567 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NUP88Q99567 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP88Q99567 Y_RNA.493-201ENST00000384422 102 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 MIR134-201ENST00000385258 73 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 RNU11-4P-201ENST00000391149 133 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 RPL32P23-201ENST00000397237 405 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 EIF4EP1-201ENST00000422311 642 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP88Q99567 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP88Q99567 RPL37P21-201ENST00000435890 276 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP88Q99567 OR6K1P-201ENST00000456766 971 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 RPS20P24-201ENST00000457473 361 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AP000797.1-201ENST00000478870 387 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP88Q99567 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.92□□□□□ -1.62
NUP88Q99567 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NUP88Q99567 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP88Q99567 PPBPP1-201ENST00000510807 373 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC010625.1-201ENST00000511296 403 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUP88Q99567 MTND3P5-201ENST00000512798 333 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP88Q99567 AC108064.1-201ENST00000513791 460 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 MTND4LP18-201ENST00000526864 291 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC105233.3-201ENST00000531125 744 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP88Q99567 AC103987.3-201ENST00000582071 292 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 MIR544B-201ENST00000582372 78 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 MIR548AB-201ENST00000584917 84 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP88Q99567 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP88Q99567 LLPHP1-201ENST00000603571 367 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC112187.2-201ENST00000604345 283 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC115621.1-201ENST00000604653 858 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC103591.3-201ENST00000608684 209 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AL357080.1-201ENST00000617394 239 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC093591.3-201ENST00000634516 308 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 AC097714.1-201ENST00000511272 1647 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP88Q99567 RLIMP1-201ENST00000339626 1680 ntBASIC4.92□□□□□ -1.62
NUP88Q99567 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP88Q99567 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP88Q99567 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP88Q99567 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NUP88Q99567 AC006971.1-201ENST00000407916 4486 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP88Q99567 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
NUP88Q99567 AC000123.3-201ENST00000624029 4975 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
NUP88Q99567 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP88Q99567 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP88Q99567 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP88Q99567 RNA5SP388-201ENST00000362584 119 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 Y_RNA.559-201ENST00000384686 107 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 MTND4LP20-201ENST00000402379 270 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 RPL21P65-201ENST00000406094 466 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 MTCO1P17-201ENST00000411522 491 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP88Q99567 AL590233.1-201ENST00000430017 456 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 SDCBPP1-201ENST00000440192 890 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.91□□□□□ -1.62
NUP88Q99567 MTCO1P19-201ENST00000443487 500 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP88Q99567 RPL7P52-201ENST00000449200 742 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 SUMO2P2-201ENST00000456482 255 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 RPS29P19-201ENST00000479709 171 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AP001025.2-201ENST00000490908 477 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AL132838.2-201ENST00000492041 314 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AC023424.2-201ENST00000493479 777 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.91□□□□□ -1.62
NUP88Q99567 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP88Q99567 MTCO3P7-201ENST00000510008 774 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP88Q99567 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP88Q99567 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.91□□□□□ -1.62
NUP88Q99567 AC006064.5-201ENST00000541782 248 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.91□□□□□ -1.62
NUP88Q99567 AC112230.1-201ENST00000604342 547 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AL390208.1-201ENST00000605885 644 ntBASIC4.91□□□□□ -1.62
NUP88Q99567 AC105429.2-201ENST00000610567 517 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms