Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC136Q96JN2 AC068831.4-201ENST00000556118 109 ntBASIC5.09□□□□□ -1.59
CCDC136Q96JN2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC136Q96JN2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC136Q96JN2 MIR5096-201ENST00000583713 70 ntBASIC5.09□□□□□ -1.59
CCDC136Q96JN2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC136Q96JN2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC136Q96JN2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC136Q96JN2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.09□□□□□ -1.59
CCDC136Q96JN2 MIR7641-1-201ENST00000627518 61 ntBASIC5.09□□□□□ -1.59
CCDC136Q96JN2 AC103706.2-201ENST00000638080 240 ntBASIC5.09□□□□□ -1.59
CCDC136Q96JN2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC136Q96JN2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCDC136Q96JN2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.09□□□□□ -1.6
CCDC136Q96JN2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC136Q96JN2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 OR4G11P-202ENST00000642116 1414 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 RNU6-1249P-201ENST00000363237 111 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 RNU6-931P-201ENST00000363850 107 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 U3.22-201ENST00000391120 215 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 ATP5F1P3-201ENST00000397213 657 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC119751.3-201ENST00000399720 670 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 Y_RNA.625-201ENST00000411256 107 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 HMGB1P37-201ENST00000439613 609 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 MEMO1P3-201ENST00000459811 302 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 RPL7P1-201ENST00000468161 747 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 HMGB1P25-201ENST00000468402 607 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 RPL7P9-201ENST00000468715 747 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 RAB9BP1-201ENST00000519581 626 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC022861.1-201ENST00000522981 663 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 HSPA8P13-201ENST00000523715 472 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 EEF1B2P4-201ENST00000551398 348 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC099489.2-201ENST00000574976 260 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AL161729.3-201ENST00000603533 673 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 BRDTP1-201ENST00000605735 677 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AC079228.1-201ENST00000624774 1049 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC136Q96JN2 AF127577.6-201ENST00000623352 2191 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 SGO1P2-201ENST00000429458 1589 ntBASIC5.08□□□□□ -1.6
CCDC136Q96JN2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 RNU6-335P-201ENST00000364563 113 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 RNU6-343P-201ENST00000364709 104 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 RNU6-952P-201ENST00000391164 108 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 ELOCP19-201ENST00000411919 318 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 RPL30P2-201ENST00000414021 291 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC011233.1-201ENST00000422812 283 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC019178.2-201ENST00000423595 505 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AL590233.1-201ENST00000430017 456 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 ZYG11AP1-201ENST00000430329 837 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 RPS3AP54-201ENST00000435535 734 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 MTCYBP34-201ENST00000439552 670 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 RPS4XP4-201ENST00000443195 763 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 H2AFZP6-201ENST00000444403 394 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 NPM1P49-201ENST00000448027 714 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 MTND2P19-201ENST00000449129 1012 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AL109741.2-201ENST00000455561 343 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 BX322784.1-201ENST00000455793 1077 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 RN7SL481P-201ENST00000477764 299 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC004263.1-201ENST00000479327 332 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC023424.2-201ENST00000493479 777 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 MTCYBP43-201ENST00000513621 740 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC093853.1-201ENST00000515689 483 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 MTND3P12-201ENST00000559068 328 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AL133507.1-201ENST00000605269 557 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AC120349.3-201ENST00000624377 529 ntBASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC136Q96JN2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms