Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC234781.5-201ENST00000508429 271 ntBASIC2.17□□□□□ -2.06
SPG11Q96JI7 RN7SKP24-201ENST00000515888 284 ntBASIC2.17□□□□□ -2.06
SPG11Q96JI7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.17□□□□□ -2.06
SPG11Q96JI7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.17□□□□□ -2.06
SPG11Q96JI7 AL133271.1-201ENST00000538229 291 ntBASIC2.17□□□□□ -2.06
SPG11Q96JI7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.17□□□□□ -2.06
SPG11Q96JI7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPG11Q96JI7 AC006111.3-201ENST00000622137 383 ntBASIC2.17□□□□□ -2.06
SPG11Q96JI7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPG11Q96JI7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
SPG11Q96JI7 AC096644.4-201ENST00000563417 2912 ntBASIC2.17□□□□□ -2.06
SPG11Q96JI7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPG11Q96JI7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SPG11Q96JI7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 U8.13-201ENST00000390842 128 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SPG11Q96JI7 RNA5SP274-201ENST00000410484 108 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 RPS12P23-201ENST00000419579 400 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 HMGN1P33-201ENST00000432945 451 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 RNA5SP320-201ENST00000516263 124 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 AC016542.2-201ENST00000624201 619 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 HMGB1P10-201ENST00000395823 563 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 AL138878.1-201ENST00000405131 347 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 RPL32P35-201ENST00000415214 394 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 AP000936.3-201ENST00000438127 255 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 AC011816.1-201ENST00000441346 546 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.16□□□□□ -2.06
SPG11Q96JI7 AC117522.2-201ENST00000510049 657 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.16□□□□□ -2.06
SPG11Q96JI7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SPG11Q96JI7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.15□□□□□ -2.07
SPG11Q96JI7 AL356292.1-201ENST00000283110 373 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 SNORA46-201ENST00000384762 135 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 ERHP2-201ENST00000402323 299 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC093392.2-201ENST00000450682 337 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC007395.1-201ENST00000451333 677 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC126121.1-201ENST00000482313 553 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC005840.1-201ENST00000498412 377 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SPG11Q96JI7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SPG11Q96JI7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SPG11Q96JI7 RPS7P13-201ENST00000413955 498 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 RPL30P2-201ENST00000414021 291 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 SPATA2P1-201ENST00000431223 2055 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC007677.1-201ENST00000445757 515 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC087385.1-201ENST00000475062 312 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC103975.1-201ENST00000482506 483 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC107398.1-201ENST00000486904 505 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.15□□□□□ -2.07
SPG11Q96JI7 OR5BN1P-201ENST00000532955 829 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC008277.2-201ENST00000605196 797 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC023813.4-201ENST00000607580 580 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.15□□□□□ -2.07
SPG11Q96JI7 AC011460.1-201ENST00000636268 1834 ntBASIC2.15□□□□□ -2.07
SPG11Q96JI7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 MAPK10-322ENST00000641485 4530 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 RPL29P29-201ENST00000448725 423 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 FGF7P3-201ENST00000454645 303 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 AC004801.2-202ENST00000463559 283 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 AL024509.2-201ENST00000493462 493 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 AC021146.1-201ENST00000511202 716 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 AC100870.1-201ENST00000522035 505 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 CKS1BP7-201ENST00000522230 235 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 AC018630.1-201ENST00000541376 925 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 AC007423.1-201ENST00000605009 627 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 AL158196.1-201ENST00000616786 434 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 MFSD8-245ENST00000641743 948 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.14□□□□□ -2.07
SPG11Q96JI7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SPG11Q96JI7 MAPK10-362ENST00000641864 4484 ntBASIC2.14□□□□□ -2.07
SPG11Q96JI7 Y_RNA.205-201ENST00000364128 113 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 RNU6-392P-201ENST00000364926 101 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 HMGB1P25-201ENST00000468402 607 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SPG11Q96JI7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.13□□□□□ -2.07
SPG11Q96JI7 AL354943.1-201ENST00000572103 781 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.13□□□□□ -2.07
SPG11Q96JI7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SPG11Q96JI7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.13□□□□□ -2.07
SPG11Q96JI7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms