Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNA5SP246-201ENST00000458909 119 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 PABPC1P3-201ENST00000469174 459 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC022447.1-201ENST00000515358 464 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 SNORA74D-201ENST00000516404 141 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 HMGB3P26-201ENST00000560051 582 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC120057.2-201ENST00000571520 271 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC012065.4-201ENST00000602445 679 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 YWHAQP7-201ENST00000603536 658 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 PRELID3BP8-201ENST00000604148 295 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC025588.3-201ENST00000604182 274 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AL009028.1-201ENST00000604895 802 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC090186.1-201ENST00000605991 572 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC096577.2-201ENST00000611455 153 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC084757.4-201ENST00000616350 526 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AP000542.2-201ENST00000623199 6179 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC092104.1-201ENST00000497346 1441 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC097504.1-201ENST00000515103 2415 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 FGF7P2-201ENST00000332473 296 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 RNU6-777P-201ENST00000364265 104 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 MIR491-201ENST00000384877 84 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 MTCYBP36-201ENST00000404146 440 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 RPS7P13-201ENST00000413955 498 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 MTCO3P41-201ENST00000414801 328 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 PSMA2P3-201ENST00000429685 675 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC091286.1-201ENST00000431233 461 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 HSPE1P28-201ENST00000443139 211 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 RPL5P30-201ENST00000465511 891 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AP000797.1-201ENST00000478870 387 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AF213884.1-201ENST00000488102 463 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 CBX3P3-201ENST00000508108 532 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC109458.1-201ENST00000508858 316 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC110768.1-201ENST00000509222 400 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC025881.1-201ENST00000518851 512 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC091489.2-201ENST00000566263 604 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC067852.4-201ENST00000590314 478 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AL160281.1-201ENST00000605307 311 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC097468.3-201ENST00000607956 456 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC010678.1-201ENST00000614118 713 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 MIR4496-201ENST00000635896 61 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AL392088.2-201ENST00000637607 285 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 AC009093.8-201ENST00000641769 292 ntBASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM43Q96BQ3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 AC032011.1-201ENST00000611703 1549 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 RNVU1-3-201ENST00000364313 161 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 SNORD82-201ENST00000365530 70 ntBASIC4.62□□□□□ -1.67
TRIM43Q96BQ3 U8.14-201ENST00000390843 143 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms