Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL138885.1-201ENST00000405921 675 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 Z86062.1-201ENST00000406773 777 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC007899.1-201ENST00000412776 775 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AL365396.1-201ENST00000430854 671 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 MTND4P6-201ENST00000438297 472 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 HMGB1P5-202ENST00000451497 985 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 USP9YP10-201ENST00000454868 628 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNED1Q8TER0 USP9YP5-201ENST00000511770 630 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AP003717.3-201ENST00000544832 1180 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 MTND4P33-201ENST00000556706 766 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.02□□□□□ -1.77
SNED1Q8TER0 MIR7106-201ENST00000612419 65 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 AC090897.3-201ENST00000636973 1157 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 LINC01355-201ENST00000566551 5444 ntBASIC4.02□□□□□ -1.77
SNED1Q8TER0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNED1Q8TER0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 Y_RNA.505-201ENST00000384489 102 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 HSPD1P16-201ENST00000402302 394 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AL391417.1-201ENST00000404100 426 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC105402.1-201ENST00000413336 545 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 RANP4-201ENST00000413361 655 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 AL449283.1-202ENST00000418249 604 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 VN1R42P-201ENST00000424651 344 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 RPS24P8-201ENST00000431490 402 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 ELOCP30-201ENST00000447108 299 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SNED1Q8TER0 PTGES3P5-201ENST00000455109 434 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 FCF1P3-201ENST00000496394 590 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC008494.2-201ENST00000514544 370 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 AL049870.4-201ENST00000555741 486 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.01□□□□□ -1.77
SNED1Q8TER0 HMGB1P50-201ENST00000605814 607 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 PART1_2.1-201ENST00000612397 250 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC090617.9-201ENST00000623751 147 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC092184.1-201ENST00000625042 715 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 AC004944.1-201ENST00000517807 3059 ntBASIC4.01□□□□□ -1.77
SNED1Q8TER0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNED1Q8TER0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4□□□□□ -1.77
SNED1Q8TER0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
SNED1Q8TER0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SNED1Q8TER0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNED1Q8TER0 RNU6-984P-201ENST00000363236 109 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 RNA5SP126-201ENST00000365092 109 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 RNA5SP235-201ENST00000365411 114 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 SNORD116-9-201ENST00000384000 95 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 RNU6-481P-201ENST00000384194 107 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 SNORD116-3-201ENST00000384287 95 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 SNORD116-7-201ENST00000384404 95 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 SNORD116-5-201ENST00000384462 95 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 AL356131.1-201ENST00000405826 414 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 RPL31P52-201ENST00000407532 367 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4□□□□□ -1.77
SNED1Q8TER0 HMGB1P49-201ENST00000418882 569 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 MTCO1P43-201ENST00000431831 488 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4□□□□□ -1.77
SNED1Q8TER0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4□□□□□ -1.77
SNED1Q8TER0 AL162388.1-201ENST00000450912 352 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 HMGB3P21-201ENST00000452483 547 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 ATG12P2-201ENST00000456830 416 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 AC010307.1-201ENST00000467206 836 ntBASIC4□□□□□ -1.77
SNED1Q8TER0 RPS29P26-201ENST00000477483 171 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms