Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AK3P4-201ENST00000504283 583 ntBASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC139783.2-201ENST00000504847 1145 ntBASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 LRRC34P2-201ENST00000514850 553 ntBASIC4.79□□□□□ -1.64
HIPK4Q8NE63 SNORA40.12-201ENST00000516329 111 ntBASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 BRD9P1-201ENST00000529855 560 ntBASIC4.79□□□□□ -1.64
HIPK4Q8NE63 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC104695.2-201ENST00000605056 775 ntBASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC087045.1-201ENST00000605856 382 ntBASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 AC009902.3-201ENST00000606235 2172 ntBASIC4.79□□□□□ -1.64
HIPK4Q8NE63 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.79□□□□□ -1.64
HIPK4Q8NE63 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC114546.3-201ENST00000623582 1734 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 SNORA69-201ENST00000383895 132 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 Y_RNA.509-201ENST00000384506 99 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 MT-TD-201ENST00000387419 68 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 RNA5SP118-201ENST00000410385 109 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 FABP7P1-201ENST00000424004 391 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 EIF4HP2-201ENST00000424380 563 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AL513185.2-201ENST00000425543 193 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 GPR143P-201ENST00000434155 205 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 CYCSP6-201ENST00000434498 302 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC016691.1-201ENST00000441321 413 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AL691482.1-201ENST00000453255 87 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 RPS20P20-201ENST00000460498 340 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 RN7SL441P-201ENST00000492388 296 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC021146.1-201ENST00000511202 716 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC087477.6-201ENST00000559595 843 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC055876.1-202ENST00000567053 138 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC068790.3-201ENST00000602988 553 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 RNU4-89P-201ENST00000607443 133 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 RNA5SP440-201ENST00000612665 119 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC024940.5-201ENST00000622889 474 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AP002505.2-201ENST00000623585 696 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AC138649.5-201ENST00000637456 137 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 AP001273.1-201ENST00000624493 3152 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 MAPK10-320ENST00000641462 6696 ntBASIC4.78□□□□□ -1.64
HIPK4Q8NE63 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIPK4Q8NE63 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 ZNF680P1-201ENST00000436625 1469 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIPK4Q8NE63 RNU6-1097P-201ENST00000363586 107 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 RN7SKP113-201ENST00000363891 295 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 Z97832.1-201ENST00000402490 328 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 AP000580.1-201ENST00000404439 358 ntBASIC4.77□□□□□ -1.65
HIPK4Q8NE63 SNORA11.3-201ENST00000408471 128 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms