Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 Y_RNA.302-201ENST00000364997 102 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 MIR16-1-201ENST00000385271 89 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 MIR1277-201ENST00000408536 78 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 MTATP6P27-201ENST00000416987 621 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AL121878.1-201ENST00000418638 859 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC048351.1-201ENST00000420064 602 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 SEPT7P5-201ENST00000434048 306 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 HMGB1P31-201ENST00000437242 427 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC092809.1-201ENST00000441469 474 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 MTND2P24-201ENST00000453434 806 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 RN7SKP46-201ENST00000515942 234 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 RNU6-1225P-201ENST00000516336 65 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 RNU1-95P-201ENST00000516357 160 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 RNU1-128P-201ENST00000516704 160 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 RNA5SP179-201ENST00000517284 121 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC026403.1-201ENST00000518938 295 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC006272.2-201ENST00000594725 163 ntBASIC5.03□□□□□ -1.6
SYNE4Q8N205 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNE4Q8N205 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNE4Q8N205 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNE4Q8N205 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNE4Q8N205 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNE4Q8N205 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNE4Q8N205 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SYNE4Q8N205 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 OR4A15-201ENST00000314706 1035 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 SNORD35B-201ENST00000363660 87 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 RNA5SP399-201ENST00000364003 117 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNE4Q8N205 VN1R8P-201ENST00000407739 893 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 RNU2-42P-201ENST00000410697 113 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 SNORA57.3-201ENST00000411095 141 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 RPS15AP38-201ENST00000413110 372 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 MTCO3P21-201ENST00000430791 643 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 RPL21P110-201ENST00000433345 446 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC098614.3-201ENST00000438957 440 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 RPL23AP89-201ENST00000439324 255 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 CBX1P4-201ENST00000439415 457 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 UBE2V1P5-201ENST00000440070 405 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 RPS7P5-201ENST00000441482 581 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AL022238.1-201ENST00000442557 355 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 RPL23AP65-201ENST00000475608 468 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 RN7SL323P-201ENST00000494712 295 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC074344.1-201ENST00000512823 224 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 SCARNA14-201ENST00000516903 136 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 RNU6-528P-201ENST00000516926 100 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 IGHV3-32-201ENST00000519182 355 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 ANP32BP3-201ENST00000559213 706 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AL391261.4-201ENST00000616012 481 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 U4.5-201ENST00000617137 123 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC073348.1-201ENST00000623002 331 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 AL034408.1-202ENST00000636088 415 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 AC099654.14-201ENST00000638599 341 ntBASIC5.02□□□□□ -1.61
SYNE4Q8N205 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SYNE4Q8N205 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms