Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC022861.1-201ENST00000522981 663 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 OR8L1P-201ENST00000534005 955 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 MIR4286-201ENST00000580651 93 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC093227.2-201ENST00000589357 285 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC068790.5-201ENST00000602741 355 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC010680.4-201ENST00000605334 543 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC106028.5-201ENST00000610332 395 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC090116.1-201ENST00000615679 446 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 MIR6875-201ENST00000617506 72 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 ZNF833P-201ENST00000424938 1494 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 PABPC1P7-201ENST00000413177 1513 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC090229.1-201ENST00000590983 1609 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC012020.1-201ENST00000624541 1728 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 Z73965.1-201ENST00000623412 2297 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 AC097504.1-201ENST00000515103 2415 ntBASIC3.83□□□□□ -1.8
BEST3Q8N1M1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BEST3Q8N1M1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC116667.1-201ENST00000604855 2072 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AL359893.1-201ENST00000447628 1580 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 RNU6-660P-201ENST00000364566 109 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 SNORD82-201ENST00000365530 70 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 RNU6-878P-201ENST00000384578 110 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 MIR153-1-201ENST00000384914 90 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 MIR134-201ENST00000385258 73 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AL445189.1-201ENST00000405722 338 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 RN7SKP27-201ENST00000410684 333 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 JKAMPP1-201ENST00000413804 919 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 HSFY4P-201ENST00000415994 1181 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 FNDC3CP-201ENST00000420795 1155 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC129850.1-201ENST00000436203 508 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC239367.2-201ENST00000447309 705 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 RPL21P103-201ENST00000479921 488 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC108145.1-201ENST00000503770 153 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC117532.1-201ENST00000514638 323 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 HIGD1AP3-201ENST00000515857 278 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC135279.1-201ENST00000543493 504 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 ACTR3BP3-201ENST00000565577 979 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC022916.3-201ENST00000592961 742 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AL031985.2-201ENST00000600955 480 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AL358072.1-201ENST00000604156 575 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AC099669.2-201ENST00000616549 437 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 AP006248.2-201ENST00000623309 592 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 MIR6715B-201ENST00000637172 77 ntBASIC3.82□□□□□ -1.8
BEST3Q8N1M1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 AC021755.1-201ENST00000559747 1447 ntBASIC3.81□□□□□ -1.8
BEST3Q8N1M1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BEST3Q8N1M1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms