Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TMEFF1Q8IYR6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEFF1Q8IYR6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.03□□□□□ -1.6
TMEFF1Q8IYR6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.03□□□□□ -1.6
TMEFF1Q8IYR6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TMEFF1Q8IYR6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEFF1Q8IYR6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 OR4G1P-203ENST00000641984 1631 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC011155.1-201ENST00000316512 456 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 RNU6-1097P-201ENST00000363586 107 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 RNU6-1318P-201ENST00000365389 103 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 RNU6-108P-201ENST00000365558 107 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 RNU6-657P-201ENST00000383904 107 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AL356057.3-201ENST00000402607 340 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 MED28P3-201ENST00000444288 531 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 RPL36AP15-201ENST00000444514 266 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 snoU13.1-201ENST00000459157 104 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 EIF4EP3-201ENST00000498782 656 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 NPM1P41-201ENST00000512920 831 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC105417.1-201ENST00000514691 285 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 RNU6-123P-201ENST00000516163 102 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC022360.1-201ENST00000521058 340 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 FRG2DP-202ENST00000566967 323 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC080078.3-201ENST00000605407 463 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AL627309.6-201ENST00000606857 840 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC119674.1-207ENST00000641355 633 ntBASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
TMEFF1Q8IYR6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 SMG1P7-201ENST00000565246 2704 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AL512646.1-201ENST00000269395 1077 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC073343.1-201ENST00000328239 651 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 SNORA20.2-201ENST00000383922 131 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 RNU2-9P-201ENST00000410194 145 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 NDUFB4P5-201ENST00000415445 361 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 UQCRBP1-201ENST00000421129 336 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC233981.1-201ENST00000423224 461 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 ARL2BPP10-201ENST00000446487 531 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 RPL37P3-201ENST00000456825 293 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 PPP1R2P5-201ENST00000457256 603 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC078785.3-201ENST00000476607 425 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 TMEM248P1-201ENST00000510579 951 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC005741.1-201ENST00000511094 432 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AP001880.2-201ENST00000538233 448 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 BNIP3P6-201ENST00000549284 499 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC110588.1-201ENST00000559699 137 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC004817.2-201ENST00000561794 651 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AC090312.1-201ENST00000580637 348 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AP005432.2-201ENST00000608162 586 ntBASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TMEFF1Q8IYR6 AL354950.2-201ENST00000617939 290 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms