Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.15□□□□□ -1.9
CDKL3Q8IVW4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 RPL23AP57-201ENST00000332361 466 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 RNU6-50P-201ENST00000362356 103 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 RNU6-252P-201ENST00000363232 107 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC011242.1-201ENST00000433596 1158 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 RPL36AP33-201ENST00000450395 310 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 BTF3P5-201ENST00000457252 467 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 RN7SL601P-201ENST00000471221 293 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 RPS26P21-201ENST00000475397 348 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 RN7SKP43-201ENST00000516173 320 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC104115.2-201ENST00000523026 687 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 CIR1P1-201ENST00000524055 1133 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AP004371.1-201ENST00000525240 214 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC139103.1-201ENST00000534696 1030 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 MIR5680-201ENST00000577577 84 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 IGHV3-29-201ENST00000604817 344 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 AC107308.1-201ENST00000615897 301 ntBASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.15□□□□□ -1.91
CDKL3Q8IVW4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 SNORD67-201ENST00000390833 111 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 MIR1250-201ENST00000408098 113 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC109780.2-201ENST00000413467 845 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 OR2B8P-201ENST00000432841 938 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 RPL23AP83-201ENST00000434984 473 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC091862.1-201ENST00000438016 1100 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 RN7SL633P-201ENST00000488974 297 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 RNA5SP380-201ENST00000517190 98 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 SERPINE4P-201ENST00000554978 281 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC025918.2-201ENST00000558683 763 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 UBL5P2-201ENST00000583788 219 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 SRGNP1-201ENST00000603392 451 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC105227.2-201ENST00000615075 605 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 U6.107-201ENST00000637108 79 ntBASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.14□□□□□ -1.91
CDKL3Q8IVW4 AC046144.1-201ENST00000478559 1853 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC010733.2-201ENST00000589496 5702 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 RNA5SP267-201ENST00000364893 126 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 RPS3AP26-201ENST00000398259 784 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 PTP4A1P3-201ENST00000433661 420 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AL591503.2-201ENST00000442314 1005 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC108860.1-201ENST00000484521 383 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 RPL32P34-201ENST00000486380 400 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 SETP12-201ENST00000514068 805 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 RNA5SP468-201ENST00000516782 93 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 OR5AK3P-201ENST00000527486 1297 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 LINC00557-201ENST00000563184 1279 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC055876.1-202ENST00000567053 138 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC012468.1-201ENST00000604888 430 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC007179.3-201ENST00000604976 235 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 AC068831.7-201ENST00000616954 363 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 FRG1DP-201ENST00000635586 771 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms