Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL445584.1-201ENST00000431451 330 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 MTND1P28-201ENST00000435623 950 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 OR9M1P-201ENST00000459641 921 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 MTND1P15-201ENST00000579262 949 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 AC115085.1-201ENST00000588924 229 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 RNU6-88P-201ENST00000606801 100 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 AC116165.2-201ENST00000616705 206 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 AC079228.1-201ENST00000624774 1049 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 AC068137.3-201ENST00000639191 341 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 AC073869.6-201ENST00000640656 341 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 PABPC1P9-201ENST00000426076 1612 ntBASIC5□□□□□ -1.61
UBE3BQ7Z3V4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5□□□□□ -1.61
UBE3BQ7Z3V4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RNU6-1122P-201ENST00000384449 107 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 MIR554-201ENST00000384874 96 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 SNORA48.7-201ENST00000391302 135 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC007066.1-201ENST00000392902 381 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RPS24P12-201ENST00000402084 394 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RNU2-66P-201ENST00000410650 161 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AL953862.1-201ENST00000423016 168 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC010975.2-201ENST00000427781 588 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AL365184.2-201ENST00000431139 435 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RPS26P40-201ENST00000435209 294 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 HLA-N-201ENST00000437516 135 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 MTATP6P13-201ENST00000438531 667 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AL450263.2-201ENST00000439400 589 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 NDUFA5P7-201ENST00000452914 242 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 FABP3P2-201ENST00000453169 399 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RNU6-1218P-201ENST00000458990 108 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RPS26P28-201ENST00000470806 348 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RPL9P33-201ENST00000484311 566 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 RPL37P25-201ENST00000507308 276 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 DEFB131D-201ENST00000526803 184 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC069240.1-201ENST00000548774 375 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AP001004.1-201ENST00000582468 324 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC090186.1-201ENST00000605991 572 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AC008785.1-201ENST00000624475 456 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AL160394.1-201ENST00000624765 724 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 AL079343.1-201ENST00000572358 1771 ntBASIC4.99□□□□□ -1.61
UBE3BQ7Z3V4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 AC092447.7-201ENST00000422212 1621 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 AL359837.1-201ENST00000381357 287 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 RNU6-603P-201ENST00000411403 107 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 OR2B8P-201ENST00000432841 938 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 AL353597.2-202ENST00000434901 373 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 MTND6P18-201ENST00000439477 513 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 Z95327.1-201ENST00000446082 482 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 DNAJC19P1-201ENST00000455312 319 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 PPIAP15-201ENST00000479662 484 ntBASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.98□□□□□ -1.61
UBE3BQ7Z3V4 MTCYBP43-201ENST00000513621 740 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms