Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RNA5SP258-201ENST00000362750 119 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 RNA5SP197-201ENST00000363357 119 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 SNORA48.8-201ENST00000391324 134 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AL591034.1-201ENST00000407447 340 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC109780.2-201ENST00000413467 845 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 HMGB3P23-201ENST00000414981 585 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 FAR1P1-201ENST00000427163 934 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC008264.1-201ENST00000447612 367 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC125238.1-201ENST00000448842 249 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 HMGN3P1-201ENST00000453847 193 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC104308.1-201ENST00000454621 333 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 RPS4XP2-201ENST00000458402 793 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC089999.1-201ENST00000460336 374 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 RPL23AP67-201ENST00000465341 474 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 HMGN2P13-201ENST00000476476 274 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC017015.1-201ENST00000477387 286 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC092185.1-201ENST00000491371 97 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 APOOP4-201ENST00000513530 597 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC005476.1-201ENST00000554427 397 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 MIR5004-201ENST00000579078 107 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC012493.2-201ENST00000595083 291 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AL606834.2-201ENST00000602954 668 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AL355812.1-201ENST00000603215 216 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC021851.1-201ENST00000608537 1082 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC009464.1-201ENST00000615731 469 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 AC017071.1-201ENST00000564407 2204 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 MIR23A-201ENST00000385245 73 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 RNU6-796P-201ENST00000391086 107 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AL357075.1-201ENST00000404107 726 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AL354719.1-201ENST00000406535 843 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC091862.1-201ENST00000438016 1100 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC006028.1-201ENST00000438379 402 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC092170.1-201ENST00000440211 356 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AL034418.1-201ENST00000448675 860 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 RPS23P3-201ENST00000470993 430 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AL121603.1-201ENST00000553815 142 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 OR4T1P-201ENST00000554933 911 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 RPL21P12-201ENST00000559810 515 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC128687.1-201ENST00000605304 619 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC016542.1-201ENST00000608259 493 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC096586.1-201ENST00000610267 561 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC090116.1-201ENST00000615679 446 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC018755.4-201ENST00000619715 454 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC092650.2-201ENST00000619984 902 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AP001002.2-201ENST00000625137 386 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AL645568.2-201ENST00000432815 1337 ntBASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.07□□□□□ -1.92
H3F3CQ6NXT2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
H3F3CQ6NXT2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
H3F3CQ6NXT2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
H3F3CQ6NXT2 RNU6-1249P-201ENST00000363237 111 ntBASIC3.06□□□□□ -1.92
H3F3CQ6NXT2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
H3F3CQ6NXT2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.06□□□□□ -1.92
H3F3CQ6NXT2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
H3F3CQ6NXT2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.06□□□□□ -1.92
H3F3CQ6NXT2 YPEL5P1-201ENST00000419731 367 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms