Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC095050.2-201ENST00000510748 1458 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 RNA5SP447-201ENST00000363749 119 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AL022238.1-201ENST00000442557 355 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 RPL17P49-201ENST00000443728 411 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 RN7SL517P-201ENST00000462240 305 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 KLF3P2-201ENST00000465138 268 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 BNIP3P41-201ENST00000503774 571 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC103783.1-201ENST00000520506 373 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC022880.1-201ENST00000534017 973 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC245505.1-201ENST00000556398 224 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 EIF1P4-201ENST00000572664 335 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC060771.1-201ENST00000582031 164 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 NRBF2P1-201ENST00000587407 859 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 CKS1BP3-201ENST00000600888 237 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC068790.3-201ENST00000602988 553 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC008498.1-201ENST00000613012 531 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC099842.1-201ENST00000619919 596 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 MIR6830-201ENST00000636015 70 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 MTND4P5-201ENST00000435821 1374 ntBASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC000123.3-201ENST00000624029 4975 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 RNU6-1279P-201ENST00000383917 103 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 RNA5SP397-201ENST00000391323 118 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 RNU2-66P-201ENST00000410650 161 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 RN7SKP33-201ENST00000410942 340 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 MTND1P21-201ENST00000412991 285 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AL137014.1-201ENST00000420490 1226 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 Z74696.2-201ENST00000436514 498 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 RPS26P2-201ENST00000440331 348 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC021146.3-201ENST00000511911 260 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 RN7SKP122-201ENST00000515923 296 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC022616.6-201ENST00000520479 119 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AP000907.2-201ENST00000530827 353 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC073648.5-201ENST00000603502 305 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 TUG1_1.1-201ENST00000610654 145 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC005332.10-201ENST00000612725 619 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 MLECP1-201ENST00000615893 709 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 PISRT1-201ENST00000626175 531 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 AC099654.13-201ENST00000639774 207 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 OR52H1-202ENST00000641796 1061 ntBASIC5.4□□□□□ -1.54
CCDC144BQ3MJ40 TLK1P1-201ENST00000456760 2440 ntBASIC5.4□□□□□ -1.55
CCDC144BQ3MJ40 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC144BQ3MJ40 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC144BQ3MJ40 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC144BQ3MJ40 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC144BQ3MJ40 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 MTCO1P9-201ENST00000505577 1534 ntBASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 Y_RNA.582-201ENST00000391023 95 ntBASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 RNU2-47P-201ENST00000410649 186 ntBASIC5.39□□□□□ -1.55
CCDC144BQ3MJ40 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms