Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AL355379.1-201ENST00000405542 640 ntBASIC3.2□□□□□ -1.9
CACNA1SQ13698 ATF1P1-201ENST00000406040 927 ntBASIC3.2□□□□□ -1.9
CACNA1SQ13698 AL356806.1-201ENST00000422524 916 ntBASIC3.2□□□□□ -1.9
CACNA1SQ13698 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.2□□□□□ -1.9
CACNA1SQ13698 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.2□□□□□ -1.9
CACNA1SQ13698 SNORD116-30-201ENST00000516468 85 ntBASIC3.2□□□□□ -1.9
CACNA1SQ13698 EIF4EP5-201ENST00000528228 640 ntBASIC3.2□□□□□ -1.9
CACNA1SQ13698 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CACNA1SQ13698 HPRT1P3-201ENST00000539521 576 ntBASIC3.2□□□□□ -1.9
CACNA1SQ13698 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CACNA1SQ13698 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.2□□□□□ -1.9
CACNA1SQ13698 AC007620.3-201ENST00000608131 497 ntBASIC3.2□□□□□ -1.9
CACNA1SQ13698 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.2□□□□□ -1.9
CACNA1SQ13698 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CACNA1SQ13698 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CACNA1SQ13698 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 RNU6-328P-201ENST00000390887 106 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 AC004987.3-201ENST00000413879 771 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 Z98742.3-201ENST00000418637 326 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 AC073464.3-201ENST00000422564 712 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 DPH3P2-201ENST00000422618 250 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 USP9YP7-201ENST00000436723 430 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 FAM103A2P-201ENST00000444122 354 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 USP9YP32-201ENST00000452432 430 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 NPM1P35-201ENST00000533043 868 ntBASIC3.19□□□□□ -1.9
CACNA1SQ13698 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.19□□□□□ -1.9
CACNA1SQ13698 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA1SQ13698 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 RPLP0P7-201ENST00000416050 667 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 MTCO3P21-201ENST00000430791 643 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 HMGB3P30-201ENST00000457863 606 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 SNX5P1-201ENST00000505757 1041 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 AP001960.1-201ENST00000506494 658 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 AC034244.2-201ENST00000514668 858 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 SNORA9.3-201ENST00000516383 129 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 RNA5SP309-201ENST00000516670 106 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 AC055876.1-202ENST00000567053 138 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 MIR3605-201ENST00000583214 100 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 VN1R84P-201ENST00000593697 235 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA1SQ13698 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA1SQ13698 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA1SQ13698 AL356320.1-201ENST00000429616 163 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 AL662791.1-201ENST00000441992 928 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 AL353705.4-201ENST00000449661 238 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 CFTRP1-201ENST00000456646 183 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 RNU6-991P-201ENST00000516168 107 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 HIGD1AP10-201ENST00000527837 282 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 AL161713.1-201ENST00000555538 145 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.18□□□□□ -1.9
CACNA1SQ13698 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 FRG1DP-201ENST00000635586 771 ntBASIC3.18□□□□□ -1.9
CACNA1SQ13698 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CACNA1SQ13698 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CACNA1SQ13698 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CACNA1SQ13698 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 MIR518C-201ENST00000384822 101 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 CYCSP45-201ENST00000402289 315 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 SRIP2-201ENST00000428470 166 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 Z99127.2-201ENST00000441426 334 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 AL592437.1-201ENST00000443781 492 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 TVP23BP2-201ENST00000455082 615 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 AC011037.1-201ENST00000483964 558 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 AP000926.3-201ENST00000497201 299 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 AC068313.1-201ENST00000604028 1008 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CACNA1SQ13698 AC006020.1-201ENST00000420179 1854 ntBASIC3.17□□□□□ -1.9
CACNA1SQ13698 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 MIR27B-201ENST00000385129 97 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 AL590004.2-201ENST00000404787 371 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 HMGB1P18-201ENST00000438801 619 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 WASF1P1-201ENST00000447560 1131 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 CEACAMP4-201ENST00000457676 421 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms