Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 ST13P14-201ENST00000474095 734 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 AC025181.1-201ENST00000477507 416 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 RPL21P103-201ENST00000479921 488 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.02□□□□□ -1.77
PTCH1Q13635 RNA5SP217-201ENST00000515959 91 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 Y_RNA.673-201ENST00000516306 88 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 AC008562.1-201ENST00000521763 330 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.02□□□□□ -1.77
PTCH1Q13635 AP002770.2-201ENST00000543613 532 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTCH1Q13635 AC011492.1-201ENST00000600023 315 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 AC025016.1-201ENST00000616746 682 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCH1Q13635 ZNF33CP-201ENST00000432492 2030 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.01□□□□□ -1.77
PTCH1Q13635 RNU6-805P-201ENST00000365643 106 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 MIR196B-201ENST00000384852 84 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.01□□□□□ -1.77
PTCH1Q13635 VTA1P1-201ENST00000414044 866 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 AC006960.1-201ENST00000419980 153 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.01□□□□□ -1.77
PTCH1Q13635 OR2AS1P-201ENST00000427827 319 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 MTND4LP7-201ENST00000431728 294 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.01□□□□□ -1.77
PTCH1Q13635 RPL29P29-201ENST00000448725 423 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.01□□□□□ -1.77
PTCH1Q13635 snoU13.15-201ENST00000459407 104 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 CABYRP1-201ENST00000465493 1045 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.01□□□□□ -1.77
PTCH1Q13635 AC005351.1-201ENST00000511152 786 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 SNORA64.4-201ENST00000516632 81 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.01□□□□□ -1.77
PTCH1Q13635 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.01□□□□□ -1.77
PTCH1Q13635 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.01□□□□□ -1.77
PTCH1Q13635 AC098826.3-201ENST00000603823 466 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.01□□□□□ -1.77
PTCH1Q13635 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.01□□□□□ -1.77
PTCH1Q13635 AC090617.9-201ENST00000623751 147 ntBASIC4.01□□□□□ -1.77
PTCH1Q13635 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCH1Q13635 MTND5P24-201ENST00000438892 1767 ntBASIC4□□□□□ -1.77
PTCH1Q13635 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4□□□□□ -1.77
PTCH1Q13635 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PTCH1Q13635 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTCH1Q13635 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
PTCH1Q13635 U3.11-201ENST00000364476 212 ntBASIC4□□□□□ -1.77
PTCH1Q13635 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4□□□□□ -1.77
PTCH1Q13635 AC245291.1-201ENST00000419501 328 ntBASIC4□□□□□ -1.77
PTCH1Q13635 AC233981.1-201ENST00000423224 461 ntBASIC4□□□□□ -1.77
PTCH1Q13635 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4□□□□□ -1.77
PTCH1Q13635 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PTCH1Q13635 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4□□□□□ -1.77
PTCH1Q13635 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4□□□□□ -1.77
PTCH1Q13635 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4□□□□□ -1.77
PTCH1Q13635 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4□□□□□ -1.77
PTCH1Q13635 SNORD108-201ENST00000459332 71 ntBASIC4□□□□□ -1.77
PTCH1Q13635 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4□□□□□ -1.77
PTCH1Q13635 LLPHP1-201ENST00000603571 367 ntBASIC4□□□□□ -1.77
PTCH1Q13635 AC105429.2-201ENST00000610567 517 ntBASIC4□□□□□ -1.77
PTCH1Q13635 MTCO1P14-201ENST00000441695 1559 ntBASIC4□□□□□ -1.77
PTCH1Q13635 AC108206.1-201ENST00000570186 4159 ntBASIC4□□□□□ -1.77
PTCH1Q13635 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTCH1Q13635 AP006437.1-201ENST00000641440 3685 ntBASIC4□□□□□ -1.77
PTCH1Q13635 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.99□□□□□ -1.77
PTCH1Q13635 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PTCH1Q13635 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCH1Q13635 MIR153-1-201ENST00000384914 90 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCH1Q13635 RPS7P5-201ENST00000441482 581 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCH1Q13635 ARL5AP2-201ENST00000444698 533 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 AP000936.2-201ENST00000447151 681 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.99□□□□□ -1.77
PTCH1Q13635 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCH1Q13635 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCH1Q13635 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.99□□□□□ -1.77
PTCH1Q13635 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.99□□□□□ -1.77
PTCH1Q13635 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PTCH1Q13635 AC008413.1-201ENST00000511864 177 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 RN7SKP283-201ENST00000517197 270 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 AP000873.5-201ENST00000533906 236 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTCH1Q13635 AC011374.2-201ENST00000607135 526 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 MIR6864-201ENST00000617935 70 ntBASIC3.99□□□□□ -1.77
PTCH1Q13635 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCH1Q13635 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.98□□□□□ -1.77
PTCH1Q13635 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTCH1Q13635 RNA5SP383-201ENST00000362934 120 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PTCH1Q13635 AL138827.1-201ENST00000402666 306 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 U3.42-201ENST00000408746 214 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 PRELID3BP11-201ENST00000414230 479 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 AC092832.1-201ENST00000422934 400 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 AL603825.1-201ENST00000438481 80 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 WASF1P1-201ENST00000447560 1131 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 snoU13.23-201ENST00000458863 104 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.98□□□□□ -1.77
PTCH1Q13635 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.98□□□□□ -1.77
PTCH1Q13635 AC090071.1-201ENST00000507713 644 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.98□□□□□ -1.77
PTCH1Q13635 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms