Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MIR8084-201ENST00000614105 89 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 RMST_10.1-201ENST00000616309 154 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 CYCSP41-201ENST00000616920 296 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC243756.2-201ENST00000618406 463 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC022079.2-201ENST00000619739 566 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCB1Q12824 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCB1Q12824 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCB1Q12824 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 MTND4P31-201ENST00000425607 1343 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 OR5H2-201ENST00000355273 945 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCB1Q12824 MIR22-201ENST00000362190 85 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 RNU6-356P-201ENST00000384140 107 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AL590290.1-201ENST00000405336 380 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 RNU2-72P-201ENST00000411175 163 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 MTCO2P1-201ENST00000424648 477 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 RPL7P44-201ENST00000424827 742 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 BX679664.1-201ENST00000434429 253 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC009969.1-201ENST00000438726 172 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC068135.1-201ENST00000446164 246 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 ST13P14-201ENST00000474095 734 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 RPS27AP1-201ENST00000475545 471 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 RPL7P23-201ENST00000493874 747 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 OR2A20P-203ENST00000498397 1268 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC111193.1-201ENST00000504097 155 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 RN7SKP272-201ENST00000516988 232 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC083923.1-201ENST00000523708 376 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC107016.2-201ENST00000547968 190 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 AL121603.1-201ENST00000553815 142 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 BNIP3P11-201ENST00000603878 563 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC091488.1-201ENST00000604239 660 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AL158211.2-201ENST00000607282 395 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AL513477.2-201ENST00000607858 568 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AC100793.4-201ENST00000613683 429 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 FRG1HP-204ENST00000617940 757 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCB1Q12824 MTND5P7-201ENST00000413558 1798 ntBASIC3.27□□□□□ -1.89
SMARCB1Q12824 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCB1Q12824 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCB1Q12824 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCB1Q12824 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC008432.1-201ENST00000615912 1320 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCB1Q12824 SNORD56.4-201ENST00000363883 71 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 RNU6-805P-201ENST00000365643 106 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 SAR1AP2-201ENST00000392696 594 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 RPS7P13-201ENST00000413955 498 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC234782.4-201ENST00000417646 1048 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 GLRXP1-201ENST00000423261 334 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 RPL35AP12-201ENST00000425362 338 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 RPS26P30-201ENST00000443431 335 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 NPM1P49-201ENST00000448027 714 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 RN7SL442P-201ENST00000473804 320 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC090751.1-201ENST00000566966 267 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC105227.2-201ENST00000615075 605 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC002546.1-201ENST00000588041 2504 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 MTCO1P18-201ENST00000455518 1419 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCB1Q12824 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCB1Q12824 MTND5P3-201ENST00000438536 1800 ntBASIC3.26□□□□□ -1.89
SMARCB1Q12824 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
SMARCB1Q12824 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 MTND4P34-201ENST00000572715 1371 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC104446.1-201ENST00000613728 1321 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms