Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC103710.3-201ENST00000608157 948 ntBASIC4.15□□□□□ -1.75
HMGXB3Q12766 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGXB3Q12766 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGXB3Q12766 AC080128.1-201ENST00000474389 1917 ntBASIC4.14□□□□□ -1.75
HMGXB3Q12766 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
HMGXB3Q12766 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGXB3Q12766 SNORA80E-201ENST00000384744 137 ntBASIC4.14□□□□□ -1.75
HMGXB3Q12766 AL591416.1-201ENST00000404015 867 ntBASIC4.14□□□□□ -1.75
HMGXB3Q12766 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.14□□□□□ -1.75
HMGXB3Q12766 AL158825.1-201ENST00000414735 521 ntBASIC4.14□□□□□ -1.75
HMGXB3Q12766 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGXB3Q12766 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGXB3Q12766 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.14□□□□□ -1.75
HMGXB3Q12766 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGXB3Q12766 CKS1BP7-201ENST00000522230 235 ntBASIC4.14□□□□□ -1.75
HMGXB3Q12766 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.14□□□□□ -1.75
HMGXB3Q12766 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HMGXB3Q12766 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGXB3Q12766 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGXB3Q12766 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGXB3Q12766 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGXB3Q12766 AC055876.1-202ENST00000567053 138 ntBASIC4.13□□□□□ -1.75
HMGXB3Q12766 AL356292.1-201ENST00000283110 373 ntBASIC4.12□□□□□ -1.75
HMGXB3Q12766 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGXB3Q12766 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGXB3Q12766 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGXB3Q12766 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGXB3Q12766 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGXB3Q12766 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.12□□□□□ -1.75
HMGXB3Q12766 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGXB3Q12766 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.12□□□□□ -1.75
HMGXB3Q12766 MAPK10-322ENST00000641485 4530 ntBASIC4.12□□□□□ -1.75
HMGXB3Q12766 DCAF13P3-201ENST00000561147 1334 ntBASIC4.12□□□□□ -1.75
HMGXB3Q12766 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGXB3Q12766 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGXB3Q12766 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 RPL23AP74-201ENST00000437246 471 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 SEPT7P3-201ENST00000455017 621 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 RPL23AP11-201ENST00000475260 469 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 AC135628.1-201ENST00000568867 534 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 AC093908.1-201ENST00000623125 8092 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGXB3Q12766 MIR148B-201ENST00000362252 99 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 Y_RNA.338-201ENST00000365320 114 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 RNA5SP210-201ENST00000391034 120 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 RN7SL297P-201ENST00000483161 293 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 AC061975.8-201ENST00000587058 721 ntBASIC4.11□□□□□ -1.75
HMGXB3Q12766 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGXB3Q12766 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGXB3Q12766 MTND5P19-201ENST00000424872 1794 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGXB3Q12766 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HMGXB3Q12766 Y_RNA.595-201ENST00000410403 105 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 AC007677.1-201ENST00000445757 515 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGXB3Q12766 NPM1P49-201ENST00000448027 714 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 AC117522.2-201ENST00000510049 657 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 AL022099.1-201ENST00000604551 712 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 AP004247.3-201ENST00000608682 624 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 FRG1DP-201ENST00000635586 771 ntBASIC4.1□□□□□ -1.75
HMGXB3Q12766 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGXB3Q12766 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGXB3Q12766 Z99496.1-201ENST00000469424 1477 ntBASIC4.09□□□□□ -1.75
HMGXB3Q12766 RNU1-91P-201ENST00000364746 163 ntBASIC4.09□□□□□ -1.75
HMGXB3Q12766 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HMGXB3Q12766 Y_RNA.466-201ENST00000384294 113 ntBASIC4.09□□□□□ -1.75
HMGXB3Q12766 SNORA41-201ENST00000384675 132 ntBASIC4.09□□□□□ -1.75
HMGXB3Q12766 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGXB3Q12766 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGXB3Q12766 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGXB3Q12766 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGXB3Q12766 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGXB3Q12766 MIR7153-201ENST00000637758 57 ntBASIC4.09□□□□□ -1.75
HMGXB3Q12766 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.09□□□□□ -1.76
HMGXB3Q12766 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HMGXB3Q12766 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HMGXB3Q12766 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.08□□□□□ -1.76
HMGXB3Q12766 MTCO2P17-201ENST00000424336 677 ntBASIC4.08□□□□□ -1.76
HMGXB3Q12766 UBE2V2P4-201ENST00000447495 259 ntBASIC4.08□□□□□ -1.76
HMGXB3Q12766 HMGB3P8-201ENST00000449709 577 ntBASIC4.08□□□□□ -1.76
HMGXB3Q12766 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGXB3Q12766 RNU6-295P-201ENST00000516901 104 ntBASIC4.08□□□□□ -1.76
HMGXB3Q12766 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGXB3Q12766 AP001521.1-201ENST00000609150 300 ntBASIC4.08□□□□□ -1.76
HMGXB3Q12766 AL353684.1-201ENST00000622677 1120 ntBASIC4.08□□□□□ -1.76
HMGXB3Q12766 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HMGXB3Q12766 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGXB3Q12766 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HMGXB3Q12766 SNORA26.9-201ENST00000391322 122 ntBASIC4.07□□□□□ -1.76
HMGXB3Q12766 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms