Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RN7SKP244-201ENST00000516513 307 ntBASIC2.05□□□□□ -2.08
SSBP1Q04837 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.05□□□□□ -2.08
SSBP1Q04837 AC025423.2-201ENST00000537570 439 ntBASIC2.05□□□□□ -2.08
SSBP1Q04837 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.05□□□□□ -2.08
SSBP1Q04837 AC103810.1-201ENST00000579873 453 ntBASIC2.05□□□□□ -2.08
SSBP1Q04837 MIR3690-201ENST00000580266 75 ntBASIC2.05□□□□□ -2.08
SSBP1Q04837 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.05□□□□□ -2.08
SSBP1Q04837 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SSBP1Q04837 AC007620.3-201ENST00000608131 497 ntBASIC2.05□□□□□ -2.08
SSBP1Q04837 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.05□□□□□ -2.08
SSBP1Q04837 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.05□□□□□ -2.08
SSBP1Q04837 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SSBP1Q04837 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.05□□□□□ -2.08
SSBP1Q04837 AC116563.2-201ENST00000624751 535 ntBASIC2.05□□□□□ -2.08
SSBP1Q04837 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.05□□□□□ -2.08
SSBP1Q04837 AC087565.3-202ENST00000642085 1603 ntBASIC2.05□□□□□ -2.08
SSBP1Q04837 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.04□□□□□ -2.08
SSBP1Q04837 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSBP1Q04837 NACA3P-201ENST00000359690 648 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 MIR27B-201ENST00000385129 97 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 RAB28P1-201ENST00000411517 641 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSBP1Q04837 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.04□□□□□ -2.08
SSBP1Q04837 MTCYBP7-201ENST00000419540 1134 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 RPL35AP12-201ENST00000425362 338 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 HMGB1P45-201ENST00000435986 653 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 AL031659.1-201ENST00000447075 539 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 AC140076.1-201ENST00000449897 361 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.04□□□□□ -2.08
SSBP1Q04837 AC104435.1-201ENST00000483483 166 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.04□□□□□ -2.08
SSBP1Q04837 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.04□□□□□ -2.08
SSBP1Q04837 RN7SKP82-201ENST00000516786 223 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 AP003102.1-201ENST00000525638 661 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 AP000889.2-201ENST00000532684 490 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.04□□□□□ -2.08
SSBP1Q04837 AL121603.1-201ENST00000553815 142 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 AC105137.2-201ENST00000569073 466 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.04□□□□□ -2.08
SSBP1Q04837 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.04□□□□□ -2.08
SSBP1Q04837 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.04□□□□□ -2.08
SSBP1Q04837 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.04□□□□□ -2.08
SSBP1Q04837 AC139769.3-201ENST00000618383 175 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.04□□□□□ -2.08
SSBP1Q04837 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.04□□□□□ -2.08
SSBP1Q04837 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SSBP1Q04837 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SSBP1Q04837 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SSBP1Q04837 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SSBP1Q04837 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SSBP1Q04837 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SSBP1Q04837 RNA5SP374-201ENST00000362939 125 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 RNU1-51P-201ENST00000365345 176 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SSBP1Q04837 MIR607-201ENST00000385241 96 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SSBP1Q04837 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.03□□□□□ -2.08
SSBP1Q04837 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.03□□□□□ -2.08
SSBP1Q04837 AC013404.1-201ENST00000413068 249 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.03□□□□□ -2.08
SSBP1Q04837 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SSBP1Q04837 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SSBP1Q04837 DPPA3P1-201ENST00000448050 469 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AC021205.1-201ENST00000468797 348 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.03□□□□□ -2.08
SSBP1Q04837 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.03□□□□□ -2.08
SSBP1Q04837 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SSBP1Q04837 RPL23AP45-201ENST00000476406 468 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AC004263.1-201ENST00000479327 332 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 RPL36AP51-201ENST00000487216 318 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 RPL30P11-201ENST00000495304 339 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.03□□□□□ -2.08
SSBP1Q04837 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.03□□□□□ -2.08
SSBP1Q04837 RNA5SP367-201ENST00000516557 118 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 RNU4-60P-201ENST00000517239 135 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AC128657.1-201ENST00000549459 145 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AL121594.4-201ENST00000556211 1196 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 CYCSP39-201ENST00000565821 309 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 MYL12BP1-201ENST00000569826 507 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 RPL23AP84-201ENST00000571193 464 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 MIR4446-201ENST00000578505 67 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AC061975.8-201ENST00000587058 721 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AP001029.3-201ENST00000588063 596 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.03□□□□□ -2.08
SSBP1Q04837 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.03□□□□□ -2.08
SSBP1Q04837 AC113194.1-201ENST00000606037 500 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.03□□□□□ -2.08
SSBP1Q04837 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.03□□□□□ -2.08
SSBP1Q04837 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.03□□□□□ -2.08
SSBP1Q04837 CKAP2P1-201ENST00000555477 2049 ntBASIC2.03□□□□□ -2.08
SSBP1Q04837 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
SSBP1Q04837 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
SSBP1Q04837 MTND4P34-201ENST00000572715 1371 ntBASIC2.02□□□□□ -2.09
SSBP1Q04837 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSBP1Q04837 AL360182.1-201ENST00000397433 468 ntBASIC2.02□□□□□ -2.09
SSBP1Q04837 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.02□□□□□ -2.09
SSBP1Q04837 RPL31P2-201ENST00000413849 377 ntBASIC2.02□□□□□ -2.09
SSBP1Q04837 MTND4P11-201ENST00000417020 1058 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms