Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC5Q00444 HMGB1P46-201ENST00000520062 610 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 AC008562.1-201ENST00000521763 330 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC5Q00444 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC5Q00444 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC5Q00444 AC090616.5-202ENST00000582111 297 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 IGHV3-29-201ENST00000604817 344 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 AC092184.1-201ENST00000625042 715 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC5Q00444 AC092593.1-201ENST00000515413 1815 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC5Q00444 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC5Q00444 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC5Q00444 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC5Q00444 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
HOXC5Q00444 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC5Q00444 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC5Q00444 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HOXC5Q00444 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AL138880.1-201ENST00000405824 642 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC5Q00444 AC005517.2-201ENST00000424673 553 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC5Q00444 RPL36AP6-201ENST00000435770 321 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 RPS15AP1-201ENST00000457423 391 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 HMGB1P38-201ENST00000490557 577 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 RPL7L1P13-201ENST00000511702 739 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 RNA5SP341-201ENST00000516261 117 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AP000857.1-201ENST00000532151 543 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC5Q00444 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC5Q00444 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC5Q00444 AC005046.1-201ENST00000608515 625 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 AC090115.4-201ENST00000609970 188 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 MIR3651-201ENST00000630427 90 ntBASIC2.61□□□□□ -1.99
HOXC5Q00444 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC5Q00444 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC5Q00444 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC5Q00444 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
HOXC5Q00444 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC5Q00444 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC5Q00444 RNU6-335P-201ENST00000364563 113 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HOXC5Q00444 PRRC2CP1-201ENST00000404428 159 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC5Q00444 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC5Q00444 YWHAZP8-201ENST00000436935 731 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 HIGD1AP11-201ENST00000438361 280 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AC112492.1-201ENST00000449607 712 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 NIPA2P5-201ENST00000452282 464 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AC003982.1-202ENST00000469928 248 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AC104689.1-201ENST00000473356 768 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 RPL23AP11-201ENST00000475260 469 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 RPS27AP1-201ENST00000475545 471 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 RPS29P26-201ENST00000477483 171 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC5Q00444 MTCO1P31-201ENST00000506355 492 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC5Q00444 AC091826.1-201ENST00000514065 313 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC5Q00444 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
HOXC5Q00444 AP002404.1-201ENST00000532005 451 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC5Q00444 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC5Q00444 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.6□□□□□ -1.99
HOXC5Q00444 NTAN1P1-201ENST00000603150 646 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AC022387.2-201ENST00000604050 448 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AC007179.3-201ENST00000604976 235 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AL392048.1-201ENST00000613946 534 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC5Q00444 MIR8057-201ENST00000620957 69 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC5Q00444 FRG1DP-201ENST00000635586 771 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC5Q00444 GABRG2-229ENST00000641017 3628 ntBASIC2.6□□□□□ -1.99
HOXC5Q00444 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC5Q00444 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC5Q00444 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC5Q00444 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXC5Q00444 SNORA51.2-201ENST00000364595 132 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC5Q00444 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AL138885.1-201ENST00000405921 675 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC5Q00444 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC5Q00444 RPL7P10-201ENST00000417407 739 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC104332.2-201ENST00000429959 156 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 HMGB1P12-201ENST00000438594 598 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms