Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SNORD88.1-201ENST00000408684 91 ntBASIC3.38□□□□□ -1.87
CBX1P83916 RNA5SP129-201ENST00000410276 118 ntBASIC3.38□□□□□ -1.87
CBX1P83916 MTCO3P12-201ENST00000416718 547 ntBASIC3.38□□□□□ -1.87
CBX1P83916 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.38□□□□□ -1.87
CBX1P83916 AC127537.2-201ENST00000439258 465 ntBASIC3.38□□□□□ -1.87
CBX1P83916 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.38□□□□□ -1.87
CBX1P83916 HMGB1P15-201ENST00000453854 435 ntBASIC3.38□□□□□ -1.87
CBX1P83916 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.38□□□□□ -1.87
CBX1P83916 RPL21P8-201ENST00000465083 535 ntBASIC3.38□□□□□ -1.87
CBX1P83916 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.38□□□□□ -1.87
CBX1P83916 MTCYBP37-201ENST00000510642 1133 ntBASIC3.38□□□□□ -1.87
CBX1P83916 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.38□□□□□ -1.87
CBX1P83916 MTCO1P35-201ENST00000515270 228 ntBASIC3.38□□□□□ -1.87
CBX1P83916 RNU6-885P-201ENST00000516607 104 ntBASIC3.38□□□□□ -1.87
CBX1P83916 MIR2116-201ENST00000517221 80 ntBASIC3.38□□□□□ -1.87
CBX1P83916 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.38□□□□□ -1.87
CBX1P83916 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.38□□□□□ -1.87
CBX1P83916 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.38□□□□□ -1.87
CBX1P83916 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.38□□□□□ -1.87
CBX1P83916 AC128687.1-201ENST00000605304 619 ntBASIC3.38□□□□□ -1.87
CBX1P83916 RNU4-89P-201ENST00000607443 133 ntBASIC3.38□□□□□ -1.87
CBX1P83916 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.38□□□□□ -1.87
CBX1P83916 AL590240.3-201ENST00000621416 943 ntBASIC3.38□□□□□ -1.87
CBX1P83916 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.38□□□□□ -1.87
CBX1P83916 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.38□□□□□ -1.87
CBX1P83916 AL365440.1-201ENST00000436135 2167 ntBASIC3.38□□□□□ -1.87
CBX1P83916 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CBX1P83916 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CBX1P83916 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CBX1P83916 DBF4P1-201ENST00000412976 1892 ntBASIC3.37□□□□□ -1.87
CBX1P83916 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CBX1P83916 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CBX1P83916 MIR141-201ENST00000384975 95 ntBASIC3.37□□□□□ -1.87
CBX1P83916 RPL7P60-201ENST00000397636 735 ntBASIC3.37□□□□□ -1.87
CBX1P83916 RPL23AP47-201ENST00000408017 460 ntBASIC3.37□□□□□ -1.87
CBX1P83916 RNU6-575P-201ENST00000411326 105 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AL133384.1-201ENST00000412744 351 ntBASIC3.37□□□□□ -1.87
CBX1P83916 FCF1P2-201ENST00000415284 583 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 AC005345.1-201ENST00000431868 217 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.37□□□□□ -1.87
CBX1P83916 RRM2P4-201ENST00000441721 562 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AL590639.1-201ENST00000456484 337 ntBASIC3.37□□□□□ -1.87
CBX1P83916 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.37□□□□□ -1.87
CBX1P83916 RPS27AP9-201ENST00000477681 438 ntBASIC3.37□□□□□ -1.87
CBX1P83916 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.37□□□□□ -1.87
CBX1P83916 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CBX1P83916 AC004062.1-201ENST00000509926 645 ntBASIC3.37□□□□□ -1.87
CBX1P83916 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 RNU5A-7P-201ENST00000515979 116 ntBASIC3.37□□□□□ -1.87
CBX1P83916 SCARNA14-201ENST00000516903 136 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.37□□□□□ -1.87
CBX1P83916 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 AL121603.1-201ENST00000553815 142 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.37□□□□□ -1.87
CBX1P83916 PARP1P2-201ENST00000556806 195 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AC093519.1-201ENST00000566109 298 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.37□□□□□ -1.87
CBX1P83916 XIAPP1-201ENST00000603162 600 ntBASIC3.37□□□□□ -1.87
CBX1P83916 MTATP6P2-201ENST00000603319 678 ntBASIC3.37□□□□□ -1.87
CBX1P83916 RPAP2P1-201ENST00000603626 1168 ntBASIC3.37□□□□□ -1.87
CBX1P83916 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.37□□□□□ -1.87
CBX1P83916 AC084824.5-201ENST00000612009 413 ntBASIC3.37□□□□□ -1.87
CBX1P83916 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
CBX1P83916 AP003355.3-201ENST00000623465 114 ntBASIC3.37□□□□□ -1.87
CBX1P83916 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.37□□□□□ -1.87
CBX1P83916 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CBX1P83916 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CBX1P83916 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CBX1P83916 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.37□□□□□ -1.87
CBX1P83916 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CBX1P83916 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CBX1P83916 AC111188.2-201ENST00000529697 1387 ntBASIC3.37□□□□□ -1.87
CBX1P83916 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CBX1P83916 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CBX1P83916 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CBX1P83916 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CBX1P83916 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CBX1P83916 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.36□□□□□ -1.87
CBX1P83916 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CBX1P83916 RNU5B-1-201ENST00000363286 116 ntBASIC3.36□□□□□ -1.87
CBX1P83916 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 SNORA56-201ENST00000383966 129 ntBASIC3.36□□□□□ -1.87
CBX1P83916 SAR1AP2-201ENST00000392696 594 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AC092638.1-201ENST00000411966 1275 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 RPS7P15-201ENST00000415804 584 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.36□□□□□ -1.87
CBX1P83916 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.36□□□□□ -1.87
CBX1P83916 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CBX1P83916 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 RPL31P54-201ENST00000429803 370 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms