Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.79□□□□□ -1.8
RIPK4P57078 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.79□□□□□ -1.8
RIPK4P57078 AC078899.3-201ENST00000599065 212 ntBASIC3.79□□□□□ -1.8
RIPK4P57078 AC007687.1-201ENST00000602704 304 ntBASIC3.79□□□□□ -1.8
RIPK4P57078 AC018618.2-201ENST00000604770 446 ntBASIC3.79□□□□□ -1.8
RIPK4P57078 AL627309.6-201ENST00000606857 840 ntBASIC3.79□□□□□ -1.8
RIPK4P57078 FRG1DP-201ENST00000635586 771 ntBASIC3.79□□□□□ -1.8
RIPK4P57078 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIPK4P57078 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIPK4P57078 AC022031.1-201ENST00000585985 2593 ntBASIC3.79□□□□□ -1.8
RIPK4P57078 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIPK4P57078 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIPK4P57078 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RIPK4P57078 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RIPK4P57078 AC096644.4-201ENST00000563417 2912 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RIPK4P57078 RNU6-98P-201ENST00000384173 107 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 RPL17P50-201ENST00000396131 546 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.78□□□□□ -1.8
RIPK4P57078 AC092685.1-201ENST00000447960 1243 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 RPL36AP33-201ENST00000450395 310 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.78□□□□□ -1.8
RIPK4P57078 AP001486.1-201ENST00000463339 476 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AC010683.1-201ENST00000473673 378 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.78□□□□□ -1.8
RIPK4P57078 AC108729.2-201ENST00000476543 840 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AC097462.2-201ENST00000504623 481 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.78□□□□□ -1.8
RIPK4P57078 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.78□□□□□ -1.8
RIPK4P57078 HIGD1AP13-201ENST00000509878 289 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 RNA5SP76-201ENST00000516277 87 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.78□□□□□ -1.8
RIPK4P57078 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RIPK4P57078 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.78□□□□□ -1.8
RIPK4P57078 AC034105.3-201ENST00000565294 442 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.78□□□□□ -1.8
RIPK4P57078 IGHV3-29-201ENST00000604817 344 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AL137843.1-201ENST00000605078 385 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AC022509.4-201ENST00000621404 572 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 AL590240.3-201ENST00000621416 943 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.78□□□□□ -1.8
RIPK4P57078 AC009039.2-201ENST00000624524 529 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.78□□□□□ -1.8
RIPK4P57078 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RIPK4P57078 FAM35CP-201ENST00000554755 2470 ntBASIC3.78□□□□□ -1.8
RIPK4P57078 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RIPK4P57078 AF127577.6-201ENST00000623352 2191 ntBASIC3.78□□□□□ -1.81
RIPK4P57078 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RIPK4P57078 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RIPK4P57078 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RIPK4P57078 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RIPK4P57078 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.77□□□□□ -1.81
RIPK4P57078 AC092832.1-201ENST00000422934 400 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.77□□□□□ -1.81
RIPK4P57078 RPL21P40-201ENST00000428586 483 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 AL390023.1-201ENST00000428836 262 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.77□□□□□ -1.81
RIPK4P57078 AC093156.1-201ENST00000440382 670 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 AC025750.2-201ENST00000442609 450 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 AC096576.1-201ENST00000489014 359 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 AC111193.1-201ENST00000504097 155 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 SCARNA13-201ENST00000516672 275 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 FAM60DP-201ENST00000524174 632 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RIPK4P57078 OR4R2P-201ENST00000530815 597 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 AC107016.2-201ENST00000547968 190 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 POLR2KP1-201ENST00000553226 168 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 AL136520.1-202ENST00000555494 763 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.77□□□□□ -1.81
RIPK4P57078 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.77□□□□□ -1.81
RIPK4P57078 VN1R92P-201ENST00000598511 928 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 BNIP3P39-201ENST00000601077 554 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 PLCE1P1-201ENST00000622094 305 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 AP006248.3-201ENST00000623580 594 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RIPK4P57078 MTND5P11-201ENST00000511037 1812 ntBASIC3.77□□□□□ -1.81
RIPK4P57078 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RIPK4P57078 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.76□□□□□ -1.81
RIPK4P57078 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
RIPK4P57078 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RIPK4P57078 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RIPK4P57078 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RIPK4P57078 RNU1-35P-201ENST00000362782 153 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 MIR591-201ENST00000385290 95 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 AL122016.1-201ENST00000403365 367 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 MTND2P9-201ENST00000422293 931 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 AC073508.1-201ENST00000428866 656 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 RPS20P5-201ENST00000434808 360 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 RPL7P29-201ENST00000437151 728 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 AL831737.1-201ENST00000441288 271 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 RPS27P5-201ENST00000444247 244 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 RPL37P3-201ENST00000456825 293 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RIPK4P57078 AL049873.1-201ENST00000480540 376 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.76□□□□□ -1.81
RIPK4P57078 SNORA76.2-201ENST00000517095 137 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 IGKV2-36-201ENST00000519999 223 ntBASIC3.76□□□□□ -1.81
RIPK4P57078 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.76□□□□□ -1.81
RIPK4P57078 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms