Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 AC109486.1-201ENST00000486833 374 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 AC005798.1-201ENST00000513715 387 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC117532.1-201ENST00000514638 323 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 MTCO1P35-201ENST00000515270 228 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 RNA5SP143-201ENST00000516936 115 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.77□□□□□ -1.81
CLDN20P56880 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 OR8L1P-201ENST00000534005 955 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.77□□□□□ -1.81
CLDN20P56880 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN20P56880 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN20P56880 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN20P56880 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN20P56880 AC022655.2-201ENST00000577280 318 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 AC010680.4-201ENST00000605334 543 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC245008.1-201ENST00000608123 476 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC092653.1-201ENST00000608509 531 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 Z69908.1-201ENST00000622603 247 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN20P56880 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN20P56880 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 ZNF833P-201ENST00000424938 1494 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLDN20P56880 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 LINC02471-203ENST00000641941 4752 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC090229.1-201ENST00000590983 1609 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 AL359893.1-201ENST00000447628 1580 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLDN20P56880 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 AC007390.2-201ENST00000606229 3803 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN20P56880 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLDN20P56880 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 Y_RNA.77-201ENST00000362962 107 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 RNVU1-3-201ENST00000364313 161 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN20P56880 MIR153-1-201ENST00000384914 90 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 MT-TH-201ENST00000387441 69 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AL022722.2-201ENST00000402519 180 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 MIR1250-201ENST00000408098 113 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 RN7SKP33-201ENST00000410942 340 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 TPMTP3-201ENST00000411928 735 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN20P56880 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN20P56880 CYP4F29P-201ENST00000420685 446 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 FNDC3CP-201ENST00000420795 1155 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AC012065.2-201ENST00000421295 375 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLDN20P56880 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 AC244035.1-201ENST00000430042 390 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.76□□□□□ -1.81
CLDN20P56880 RPL23AP46-201ENST00000438548 490 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN20P56880 RPL29P29-201ENST00000448725 423 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 RPL21P103-201ENST00000479921 488 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN20P56880 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN20P56880 OR5H5P-201ENST00000503164 928 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 BNIP3P41-201ENST00000503774 571 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN20P56880 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN20P56880 AC093809.1-201ENST00000509155 340 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 NDUFA5P2-201ENST00000519723 344 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AC022861.1-201ENST00000522981 663 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN20P56880 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 ACTR3BP3-201ENST00000565577 979 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN20P56880 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN20P56880 AP001004.1-201ENST00000582468 324 ntBASIC3.76□□□□□ -1.81
CLDN20P56880 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN20P56880 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms