Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC016716.1-201ENST00000265882 708 ntBASIC3.64□□□□□ -1.83
PEX3P56589 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PEX3P56589 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 Y_RNA.578-201ENST00000390903 88 ntBASIC3.64□□□□□ -1.83
PEX3P56589 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.64□□□□□ -1.83
PEX3P56589 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.64□□□□□ -1.83
PEX3P56589 RAC1P8-201ENST00000427086 527 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC114973.1-201ENST00000429057 632 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.64□□□□□ -1.83
PEX3P56589 ATP5C1P1-201ENST00000441945 895 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC112492.1-201ENST00000449607 712 ntBASIC3.64□□□□□ -1.83
PEX3P56589 RPL23AP15-201ENST00000450202 459 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.64□□□□□ -1.83
PEX3P56589 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.64□□□□□ -1.83
PEX3P56589 AP001086.1-201ENST00000494882 321 ntBASIC3.64□□□□□ -1.83
PEX3P56589 RPL21P131-201ENST00000497298 483 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC010460.2-201ENST00000509054 677 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.64□□□□□ -1.83
PEX3P56589 RNU6-202P-201ENST00000515998 96 ntBASIC3.64□□□□□ -1.83
PEX3P56589 OR10V3P-201ENST00000525712 725 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.64□□□□□ -1.83
PEX3P56589 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.64□□□□□ -1.83
PEX3P56589 AC044913.1-201ENST00000557200 430 ntBASIC3.64□□□□□ -1.83
PEX3P56589 EIF5A2P1-201ENST00000564027 460 ntBASIC3.64□□□□□ -1.83
PEX3P56589 MIR4425-201ENST00000580572 84 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.64□□□□□ -1.83
PEX3P56589 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.64□□□□□ -1.83
PEX3P56589 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 MIR6864-201ENST00000617935 70 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC107081.3-201ENST00000612715 2034 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 RIOK3P1-201ENST00000418778 1528 ntBASIC3.64□□□□□ -1.83
PEX3P56589 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
PEX3P56589 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PEX3P56589 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 AC000367.1-201ENST00000452711 1766 ntBASIC3.63□□□□□ -1.83
PEX3P56589 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.63□□□□□ -1.83
PEX3P56589 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PEX3P56589 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.63□□□□□ -1.83
PEX3P56589 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PEX3P56589 RNU6-839P-201ENST00000363347 108 ntBASIC3.63□□□□□ -1.83
PEX3P56589 RNU6-224P-201ENST00000384055 107 ntBASIC3.63□□□□□ -1.83
PEX3P56589 RNA5SP120-201ENST00000410900 112 ntBASIC3.63□□□□□ -1.83
PEX3P56589 RNU4-22P-201ENST00000411058 166 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AC069218.2-201ENST00000411665 344 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.63□□□□□ -1.83
PEX3P56589 NANOGP5-201ENST00000424456 877 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.63□□□□□ -1.83
PEX3P56589 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.63□□□□□ -1.83
PEX3P56589 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.63□□□□□ -1.83
PEX3P56589 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.63□□□□□ -1.83
PEX3P56589 BTF3P5-201ENST00000457252 467 ntBASIC3.63□□□□□ -1.83
PEX3P56589 NF1P3-201ENST00000457709 450 ntBASIC3.63□□□□□ -1.83
PEX3P56589 RPL32P34-201ENST00000486380 400 ntBASIC3.63□□□□□ -1.83
PEX3P56589 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.63□□□□□ -1.83
PEX3P56589 RN7SKP96-201ENST00000516948 297 ntBASIC3.63□□□□□ -1.83
PEX3P56589 RNA5SP135-201ENST00000517019 125 ntBASIC3.63□□□□□ -1.83
PEX3P56589 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.63□□□□□ -1.83
PEX3P56589 NDUFB9P3-201ENST00000521269 501 ntBASIC3.63□□□□□ -1.83
PEX3P56589 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.63□□□□□ -1.83
PEX3P56589 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.63□□□□□ -1.83
PEX3P56589 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.63□□□□□ -1.83
PEX3P56589 AL132857.1-201ENST00000555180 708 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.63□□□□□ -1.83
PEX3P56589 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.63□□□□□ -1.83
PEX3P56589 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.63□□□□□ -1.83
PEX3P56589 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.63□□□□□ -1.83
PEX3P56589 ZNF415P1-201ENST00000582279 1166 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AC067852.4-201ENST00000590314 478 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AP001542.2-201ENST00000593141 364 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.63□□□□□ -1.83
PEX3P56589 CKS1BP3-201ENST00000600888 237 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AC007179.3-201ENST00000604976 235 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AC113194.1-201ENST00000606037 500 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AL359535.1-201ENST00000612100 1087 ntBASIC3.63□□□□□ -1.83
PEX3P56589 uc_338.1-201ENST00000612113 180 ntBASIC3.63□□□□□ -1.83
PEX3P56589 AC009464.1-201ENST00000615731 469 ntBASIC3.63□□□□□ -1.83
PEX3P56589 SNORD39.4-201ENST00000620099 78 ntBASIC3.63□□□□□ -1.83
PEX3P56589 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 AL157770.1-201ENST00000623049 439 ntBASIC3.63□□□□□ -1.83
PEX3P56589 OR1S1-201ENST00000624470 978 ntBASIC3.63□□□□□ -1.83
PEX3P56589 ZNF826P-207ENST00000622273 1910 ntBASIC3.63□□□□□ -1.83
PEX3P56589 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PEX3P56589 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PEX3P56589 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PEX3P56589 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PEX3P56589 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PEX3P56589 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PEX3P56589 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms