Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
NUP98P52948 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUP98P52948 AC097714.1-201ENST00000511272 1647 ntBASIC2.99□□□□□ -1.93
NUP98P52948 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NUP98P52948 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUP98P52948 SNORA41-201ENST00000384675 132 ntBASIC2.99□□□□□ -1.93
NUP98P52948 AC093084.1-201ENST00000424233 687 ntBASIC2.99□□□□□ -1.93
NUP98P52948 AC018634.1-201ENST00000437554 401 ntBASIC2.99□□□□□ -1.93
NUP98P52948 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUP98P52948 CASP3P1-201ENST00000446037 609 ntBASIC2.99□□□□□ -1.93
NUP98P52948 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
NUP98P52948 AC133134.1-201ENST00000466800 359 ntBASIC2.99□□□□□ -1.93
NUP98P52948 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP98P52948 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP98P52948 RNA5SP76-201ENST00000516277 87 ntBASIC2.99□□□□□ -1.93
NUP98P52948 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP98P52948 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.99□□□□□ -1.93
NUP98P52948 AL109741.3-201ENST00000561748 592 ntBASIC2.99□□□□□ -1.93
NUP98P52948 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUP98P52948 PSMA6P4-201ENST00000603247 718 ntBASIC2.99□□□□□ -1.93
NUP98P52948 AC046143.2-201ENST00000609789 160 ntBASIC2.99□□□□□ -1.93
NUP98P52948 AL356274.1-201ENST00000617064 410 ntBASIC2.99□□□□□ -1.93
NUP98P52948 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUP98P52948 AC134882.1-201ENST00000603738 1676 ntBASIC2.99□□□□□ -1.93
NUP98P52948 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.98□□□□□ -1.93
NUP98P52948 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.98□□□□□ -1.93
NUP98P52948 ATG3P1-201ENST00000419507 911 ntBASIC2.98□□□□□ -1.93
NUP98P52948 AC009969.1-201ENST00000438726 172 ntBASIC2.98□□□□□ -1.93
NUP98P52948 Z99127.2-201ENST00000441426 334 ntBASIC2.98□□□□□ -1.93
NUP98P52948 RNU7-170P-201ENST00000459303 61 ntBASIC2.98□□□□□ -1.93
NUP98P52948 SNORD116-26-201ENST00000516006 96 ntBASIC2.98□□□□□ -1.93
NUP98P52948 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP98P52948 AC009063.1-201ENST00000563342 702 ntBASIC2.98□□□□□ -1.93
NUP98P52948 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP98P52948 VN1R81P-201ENST00000602085 372 ntBASIC2.98□□□□□ -1.93
NUP98P52948 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.98□□□□□ -1.93
NUP98P52948 AC067852.7-201ENST00000623270 535 ntBASIC2.98□□□□□ -1.93
NUP98P52948 CFTRP2-201ENST00000634304 199 ntBASIC2.98□□□□□ -1.93
NUP98P52948 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NUP98P52948 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUP98P52948 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
NUP98P52948 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
NUP98P52948 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.98□□□□□ -1.93
NUP98P52948 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUP98P52948 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.98□□□□□ -1.93
NUP98P52948 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP98P52948 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.98□□□□□ -1.93
NUP98P52948 BX276092.3-201ENST00000424182 230 ntBASIC2.98□□□□□ -1.93
NUP98P52948 AP001317.1-201ENST00000531194 960 ntBASIC2.98□□□□□ -1.93
NUP98P52948 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.98□□□□□ -1.93
NUP98P52948 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.98□□□□□ -1.93
NUP98P52948 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP98P52948 YWHAZP1-201ENST00000556286 722 ntBASIC2.98□□□□□ -1.93
NUP98P52948 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP98P52948 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
NUP98P52948 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.97□□□□□ -1.93
NUP98P52948 AL133412.1-201ENST00000380194 2992 ntBASIC2.97□□□□□ -1.93
NUP98P52948 AC011155.1-201ENST00000316512 456 ntBASIC2.97□□□□□ -1.93
NUP98P52948 OR56A5-201ENST00000340110 738 ntBASIC2.97□□□□□ -1.93
NUP98P52948 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NUP98P52948 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP98P52948 RPL21P18-201ENST00000469899 480 ntBASIC2.97□□□□□ -1.93
NUP98P52948 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP98P52948 AC112673.1-201ENST00000513168 575 ntBASIC2.97□□□□□ -1.93
NUP98P52948 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP98P52948 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP98P52948 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.97□□□□□ -1.93
NUP98P52948 ELOCP31-201ENST00000540463 467 ntBASIC2.97□□□□□ -1.93
NUP98P52948 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP98P52948 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP98P52948 GMCL1P2-201ENST00000605230 823 ntBASIC2.97□□□□□ -1.93
NUP98P52948 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.97□□□□□ -1.93
NUP98P52948 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
NUP98P52948 AC241585.2-209ENST00000638217 143 ntBASIC2.97□□□□□ -1.93
NUP98P52948 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP98P52948 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.97□□□□□ -1.93
NUP98P52948 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.96□□□□□ -1.94
NUP98P52948 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NUP98P52948 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NUP98P52948 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
NUP98P52948 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NUP98P52948 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.96□□□□□ -1.94
NUP98P52948 AC244505.4-201ENST00000434905 287 ntBASIC2.96□□□□□ -1.94
NUP98P52948 CACYBPP1-201ENST00000438592 684 ntBASIC2.96□□□□□ -1.94
NUP98P52948 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NUP98P52948 SSXP5-201ENST00000443473 287 ntBASIC2.96□□□□□ -1.94
NUP98P52948 RPL21P71-201ENST00000465598 459 ntBASIC2.96□□□□□ -1.94
NUP98P52948 LINC00888-204ENST00000487386 421 ntBASIC2.96□□□□□ -1.94
NUP98P52948 RPL9P6-201ENST00000492764 598 ntBASIC2.96□□□□□ -1.94
NUP98P52948 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.96□□□□□ -1.94
NUP98P52948 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.96□□□□□ -1.94
NUP98P52948 AP000873.5-201ENST00000533906 236 ntBASIC2.96□□□□□ -1.94
NUP98P52948 AL158827.2-201ENST00000602494 330 ntBASIC2.96□□□□□ -1.94
NUP98P52948 MIR6766-201ENST00000622641 72 ntBASIC2.96□□□□□ -1.94
NUP98P52948 AL691447.3-201ENST00000635020 330 ntBASIC2.96□□□□□ -1.94
NUP98P52948 MTND5P6-201ENST00000422338 1798 ntBASIC2.96□□□□□ -1.94
NUP98P52948 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.96□□□□□ -1.94
NUP98P52948 AL136964.1-201ENST00000622038 2990 ntBASIC2.96□□□□□ -1.94
NUP98P52948 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
NUP98P52948 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms