Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA9P31269 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA9P31269 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HOXA9P31269 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA9P31269 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA9P31269 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA9P31269 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXA9P31269 MTND4P31-201ENST00000425607 1343 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA9P31269 RNU4-31P-201ENST00000384211 141 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA9P31269 ATP5F1P6-201ENST00000402768 767 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 RPL7P25-201ENST00000404151 721 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 AL158050.1-201ENST00000416077 457 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA9P31269 GLRXP1-201ENST00000423261 334 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 GTF2IP23-201ENST00000423746 351 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 TXNP1-201ENST00000441872 371 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA9P31269 AC016696.1-201ENST00000446949 318 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA9P31269 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 RPL23AP55-201ENST00000498163 452 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA9P31269 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA9P31269 MTND4LP22-201ENST00000508209 276 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 RN7SKP277-201ENST00000516895 283 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXA9P31269 IGKV2-36-201ENST00000519999 223 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA9P31269 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXA9P31269 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA9P31269 AC011492.1-201ENST00000600023 315 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 SNRPGP15-201ENST00000600149 222 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 AC011374.2-201ENST00000607135 526 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 CYCSP41-201ENST00000616920 296 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 AP000720.1-201ENST00000625091 483 ntBASIC3.28□□□□□ -1.88
HOXA9P31269 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXA9P31269 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
HOXA9P31269 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
HOXA9P31269 AL049737.1-201ENST00000413920 1403 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA9P31269 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA9P31269 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA9P31269 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA9P31269 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HOXA9P31269 TATDN1P1-201ENST00000414123 891 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA9P31269 RPS15AP40-201ENST00000419621 391 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AC244098.2-201ENST00000422068 99 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA9P31269 PNRC2P1-201ENST00000423940 420 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 UBE2D3P3-201ENST00000426992 425 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXA9P31269 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA9P31269 RPS27P5-201ENST00000444247 244 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AL590399.6-201ENST00000446396 307 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HOXA9P31269 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA9P31269 RPL23AP44-201ENST00000482216 473 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA9P31269 RPL23AP94-201ENST00000512518 302 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AC010374.2-201ENST00000512933 535 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA9P31269 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA9P31269 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXA9P31269 HMGN2P28-201ENST00000606102 262 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AL590240.3-201ENST00000621416 943 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AL136164.4-201ENST00000625013 2135 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 AL137790.1-201ENST00000634283 177 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 GTF2H2B-203ENST00000508065 1432 ntBASIC3.27□□□□□ -1.89
HOXA9P31269 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA9P31269 PWAR6-201ENST00000552334 4618 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA9P31269 RNU6-609P-201ENST00000365459 107 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA9P31269 MIR142-201ENST00000384835 87 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA9P31269 NUP35P2-201ENST00000416748 943 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AL139281.1-201ENST00000422120 335 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 MTCO2P1-201ENST00000424648 477 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 UBE2V1P6-201ENST00000430840 422 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AC025750.2-201ENST00000442609 450 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA9P31269 PRDX3P4-201ENST00000470828 747 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 RPS4XP22-201ENST00000480755 780 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 OR2A20P-203ENST00000498397 1268 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms