Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.92□□□□□ -1.62
ATF4P18848 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.92□□□□□ -1.62
ATF4P18848 MT1CP-201ENST00000567054 174 ntBASIC4.92□□□□□ -1.62
ATF4P18848 MIR4271-201ENST00000582451 67 ntBASIC4.92□□□□□ -1.62
ATF4P18848 AC024267.2-201ENST00000582737 417 ntBASIC4.92□□□□□ -1.62
ATF4P18848 AC007687.1-201ENST00000602704 304 ntBASIC4.92□□□□□ -1.62
ATF4P18848 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.92□□□□□ -1.62
ATF4P18848 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.92□□□□□ -1.62
ATF4P18848 MIR6085-201ENST00000618314 110 ntBASIC4.92□□□□□ -1.62
ATF4P18848 MTND5P42-201ENST00000637720 498 ntBASIC4.92□□□□□ -1.62
ATF4P18848 AC112487.2-201ENST00000637950 304 ntBASIC4.92□□□□□ -1.62
ATF4P18848 AC073869.8-201ENST00000641806 335 ntBASIC4.92□□□□□ -1.62
ATF4P18848 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.92□□□□□ -1.62
ATF4P18848 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.92□□□□□ -1.62
ATF4P18848 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATF4P18848 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
ATF4P18848 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
ATF4P18848 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 AL157700.1-201ENST00000561973 1432 ntBASIC4.91□□□□□ -1.62
ATF4P18848 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 SNORA73.1-201ENST00000363107 205 ntBASIC4.91□□□□□ -1.62
ATF4P18848 RN7SKP250-201ENST00000363924 321 ntBASIC4.91□□□□□ -1.62
ATF4P18848 RNU6-1013P-201ENST00000384180 107 ntBASIC4.91□□□□□ -1.62
ATF4P18848 HSPE1P8-201ENST00000406997 288 ntBASIC4.91□□□□□ -1.62
ATF4P18848 U3.43-201ENST00000410734 213 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AL513331.1-201ENST00000411908 397 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.91□□□□□ -1.62
ATF4P18848 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.91□□□□□ -1.62
ATF4P18848 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 AL353678.1-201ENST00000422735 741 ntBASIC4.91□□□□□ -1.62
ATF4P18848 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
ATF4P18848 TAAR7P-201ENST00000436141 242 ntBASIC4.91□□□□□ -1.62
ATF4P18848 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 AC104058.1-201ENST00000448028 297 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AL121578.2-201ENST00000448797 447 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC092967.1-201ENST00000449016 481 ntBASIC4.91□□□□□ -1.62
ATF4P18848 RNU6-1208P-201ENST00000459588 107 ntBASIC4.91□□□□□ -1.62
ATF4P18848 RN7SL168P-201ENST00000463821 279 ntBASIC4.91□□□□□ -1.62
ATF4P18848 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.91□□□□□ -1.62
ATF4P18848 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ATF4P18848 AL359273.1-201ENST00000510918 627 ntBASIC4.91□□□□□ -1.62
ATF4P18848 RNA5SP92-201ENST00000516437 110 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.91□□□□□ -1.62
ATF4P18848 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.91□□□□□ -1.62
ATF4P18848 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.91□□□□□ -1.62
ATF4P18848 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.91□□□□□ -1.62
ATF4P18848 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.91□□□□□ -1.62
ATF4P18848 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.91□□□□□ -1.62
ATF4P18848 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.91□□□□□ -1.62
ATF4P18848 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.91□□□□□ -1.62
ATF4P18848 AC005951.2-201ENST00000576282 495 ntBASIC4.91□□□□□ -1.62
ATF4P18848 MIR3921-201ENST00000577308 85 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.91□□□□□ -1.62
ATF4P18848 AC005255.1-201ENST00000593748 216 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 AP001330.4-201ENST00000604350 154 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AL022345.1-201ENST00000607292 135 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AP002826.1-201ENST00000608835 315 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC092807.2-201ENST00000609367 243 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC079395.2-201ENST00000610982 737 ntBASIC4.91□□□□□ -1.62
ATF4P18848 MIR7109-201ENST00000613748 65 ntBASIC4.91□□□□□ -1.62
ATF4P18848 RMST_7.1-201ENST00000621935 268 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC005858.4-201ENST00000623191 700 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC073592.6-201ENST00000624271 415 ntBASIC4.91□□□□□ -1.62
ATF4P18848 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 TPTEP1-208ENST00000636884 213 ntBASIC4.91□□□□□ -1.62
ATF4P18848 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.91□□□□□ -1.62
ATF4P18848 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATF4P18848 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
ATF4P18848 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ATF4P18848 AC104623.2-202ENST00000623477 4002 ntBASIC4.9□□□□□ -1.62
ATF4P18848 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
ATF4P18848 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
ATF4P18848 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ATF4P18848 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ATF4P18848 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.9□□□□□ -1.63
ATF4P18848 RNU6-288P-201ENST00000363690 104 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms