Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.16□□□□□ -1.9
NCK1P16333 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.16□□□□□ -1.9
NCK1P16333 AC087481.2-201ENST00000565492 330 ntBASIC3.16□□□□□ -1.9
NCK1P16333 SNORD84-203ENST00000584275 78 ntBASIC3.16□□□□□ -1.9
NCK1P16333 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.16□□□□□ -1.9
NCK1P16333 AC006116.10-201ENST00000591836 581 ntBASIC3.16□□□□□ -1.9
NCK1P16333 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.16□□□□□ -1.9
NCK1P16333 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NCK1P16333 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.16□□□□□ -1.9
NCK1P16333 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NCK1P16333 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.15□□□□□ -1.9
NCK1P16333 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.15□□□□□ -1.9
NCK1P16333 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
NCK1P16333 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.15□□□□□ -1.9
NCK1P16333 HMGB1P5-201ENST00000255320 642 ntBASIC3.15□□□□□ -1.91
NCK1P16333 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.15□□□□□ -1.91
NCK1P16333 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
NCK1P16333 SUGT1P1-201ENST00000379514 476 ntBASIC3.15□□□□□ -1.91
NCK1P16333 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NCK1P16333 U3.29-201ENST00000391296 212 ntBASIC3.15□□□□□ -1.91
NCK1P16333 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.15□□□□□ -1.91
NCK1P16333 AC092638.1-201ENST00000411966 1275 ntBASIC3.15□□□□□ -1.91
NCK1P16333 ATP5A1P2-201ENST00000412323 255 ntBASIC3.15□□□□□ -1.91
NCK1P16333 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NCK1P16333 HMGB3P23-201ENST00000414981 585 ntBASIC3.15□□□□□ -1.91
NCK1P16333 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.15□□□□□ -1.91
NCK1P16333 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.15□□□□□ -1.91
NCK1P16333 NEK4P1-201ENST00000433383 879 ntBASIC3.15□□□□□ -1.91
NCK1P16333 ARF4P4-201ENST00000439608 520 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC115115.1-201ENST00000449927 248 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.15□□□□□ -1.91
NCK1P16333 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.15□□□□□ -1.91
NCK1P16333 AC092754.2-201ENST00000463506 460 ntBASIC3.15□□□□□ -1.91
NCK1P16333 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
NCK1P16333 HMGB1P25-201ENST00000468402 607 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 AC093767.1-201ENST00000504523 156 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 AP001207.2-201ENST00000519490 539 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 AC019227.1-201ENST00000526902 510 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.15□□□□□ -1.91
NCK1P16333 AP001317.1-201ENST00000531194 960 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.15□□□□□ -1.91
NCK1P16333 AL389895.1-201ENST00000554127 252 ntBASIC3.15□□□□□ -1.91
NCK1P16333 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.15□□□□□ -1.91
NCK1P16333 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 HSPE1P5-201ENST00000561489 272 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AL845331.3-202ENST00000562856 261 ntBASIC3.15□□□□□ -1.91
NCK1P16333 MIR5685-201ENST00000579080 79 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.15□□□□□ -1.91
NCK1P16333 AP001029.3-201ENST00000588063 596 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC092474.3-201ENST00000603022 568 ntBASIC3.15□□□□□ -1.91
NCK1P16333 XIAPP1-201ENST00000603162 600 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AL159169.3-201ENST00000608871 561 ntBASIC3.15□□□□□ -1.91
NCK1P16333 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.15□□□□□ -1.91
NCK1P16333 AL110115.1-201ENST00000614396 364 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC008083.4-201ENST00000615076 444 ntBASIC3.15□□□□□ -1.91
NCK1P16333 ZYXP1-201ENST00000617638 118 ntBASIC3.15□□□□□ -1.91
NCK1P16333 AC018755.4-201ENST00000619715 454 ntBASIC3.15□□□□□ -1.91
NCK1P16333 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.15□□□□□ -1.91
NCK1P16333 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.15□□□□□ -1.91
NCK1P16333 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NCK1P16333 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
NCK1P16333 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
NCK1P16333 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.14□□□□□ -1.91
NCK1P16333 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.14□□□□□ -1.91
NCK1P16333 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NCK1P16333 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.14□□□□□ -1.91
NCK1P16333 RNU6-1066P-201ENST00000363573 105 ntBASIC3.14□□□□□ -1.91
NCK1P16333 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NCK1P16333 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NCK1P16333 CYCSP45-201ENST00000402289 315 ntBASIC3.14□□□□□ -1.91
NCK1P16333 PPIAP31-201ENST00000405422 495 ntBASIC3.14□□□□□ -1.91
NCK1P16333 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.14□□□□□ -1.91
NCK1P16333 MTCYBP32-201ENST00000427945 1084 ntBASIC3.14□□□□□ -1.91
NCK1P16333 AC092634.2-201ENST00000428146 1010 ntBASIC3.14□□□□□ -1.91
NCK1P16333 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.14□□□□□ -1.91
NCK1P16333 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.14□□□□□ -1.91
NCK1P16333 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.14□□□□□ -1.91
NCK1P16333 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.14□□□□□ -1.91
NCK1P16333 AL672167.3-201ENST00000465951 960 ntBASIC3.14□□□□□ -1.91
NCK1P16333 RPS27AP1-201ENST00000475545 471 ntBASIC3.14□□□□□ -1.91
NCK1P16333 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
NCK1P16333 KCTD9P5-201ENST00000504141 1170 ntBASIC3.14□□□□□ -1.91
NCK1P16333 MTCO3P27-201ENST00000514397 196 ntBASIC3.14□□□□□ -1.91
NCK1P16333 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.14□□□□□ -1.91
NCK1P16333 RN7SKP13-201ENST00000515933 244 ntBASIC3.14□□□□□ -1.91
NCK1P16333 AC027309.2-201ENST00000520566 192 ntBASIC3.14□□□□□ -1.91
NCK1P16333 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.14□□□□□ -1.91
NCK1P16333 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NCK1P16333 AC005476.1-201ENST00000554427 397 ntBASIC3.14□□□□□ -1.91
NCK1P16333 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
NCK1P16333 BNIP3P5-201ENST00000562290 498 ntBASIC3.14□□□□□ -1.91
NCK1P16333 MIR4286-201ENST00000580651 93 ntBASIC3.14□□□□□ -1.91
NCK1P16333 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms