Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.01□□□□□ -1.77
CFTRP13569 AC010881.1-201ENST00000433830 235 ntBASIC4.01□□□□□ -1.77
CFTRP13569 RPL23AP74-201ENST00000437246 471 ntBASIC4.01□□□□□ -1.77
CFTRP13569 AC011037.1-201ENST00000483964 558 ntBASIC4.01□□□□□ -1.77
CFTRP13569 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.01□□□□□ -1.77
CFTRP13569 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.01□□□□□ -1.77
CFTRP13569 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CFTRP13569 MAPK10-322ENST00000641485 4530 ntBASIC4.01□□□□□ -1.77
CFTRP13569 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CFTRP13569 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CFTRP13569 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4□□□□□ -1.77
CFTRP13569 AL356292.1-201ENST00000283110 373 ntBASIC4□□□□□ -1.77
CFTRP13569 AL162578.1-201ENST00000406202 378 ntBASIC4□□□□□ -1.77
CFTRP13569 AL356806.1-201ENST00000422524 916 ntBASIC4□□□□□ -1.77
CFTRP13569 HMGB1P48-201ENST00000446155 598 ntBASIC4□□□□□ -1.77
CFTRP13569 LINC00888-204ENST00000487386 421 ntBASIC4□□□□□ -1.77
CFTRP13569 NIPA2P2-201ENST00000496376 1083 ntBASIC4□□□□□ -1.77
CFTRP13569 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CFTRP13569 AL109741.3-201ENST00000561748 592 ntBASIC4□□□□□ -1.77
CFTRP13569 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4□□□□□ -1.77
CFTRP13569 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CFTRP13569 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CFTRP13569 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CFTRP13569 MTCO2P17-201ENST00000424336 677 ntBASIC3.99□□□□□ -1.77
CFTRP13569 NPM1P49-201ENST00000448027 714 ntBASIC3.99□□□□□ -1.77
CFTRP13569 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.99□□□□□ -1.77
CFTRP13569 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CFTRP13569 AC147055.1-201ENST00000509261 750 ntBASIC3.99□□□□□ -1.77
CFTRP13569 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.99□□□□□ -1.77
CFTRP13569 AC009487.2-201ENST00000420969 6821 ntBASIC3.99□□□□□ -1.77
CFTRP13569 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.98□□□□□ -1.77
CFTRP13569 SNORA41-201ENST00000384675 132 ntBASIC3.98□□□□□ -1.77
CFTRP13569 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.98□□□□□ -1.77
CFTRP13569 RPL23AP14-201ENST00000468281 468 ntBASIC3.98□□□□□ -1.77
CFTRP13569 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.98□□□□□ -1.77
CFTRP13569 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.98□□□□□ -1.77
CFTRP13569 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.98□□□□□ -1.77
CFTRP13569 MTCYBP28-201ENST00000566728 1132 ntBASIC3.98□□□□□ -1.77
CFTRP13569 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.98□□□□□ -1.77
CFTRP13569 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.98□□□□□ -1.77
CFTRP13569 AC023813.4-201ENST00000607580 580 ntBASIC3.98□□□□□ -1.77
CFTRP13569 MIR6845-201ENST00000613182 61 ntBASIC3.98□□□□□ -1.77
CFTRP13569 MIR6873-201ENST00000622788 63 ntBASIC3.98□□□□□ -1.77
CFTRP13569 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CFTRP13569 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CFTRP13569 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CFTRP13569 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CFTRP13569 RNU6-1159P-201ENST00000362933 107 ntBASIC3.98□□□□□ -1.77
CFTRP13569 AL023284.1-201ENST00000403956 276 ntBASIC3.98□□□□□ -1.77
CFTRP13569 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CFTRP13569 ATG3P1-201ENST00000419507 911 ntBASIC3.98□□□□□ -1.77
CFTRP13569 AC092427.1-202ENST00000430569 476 ntBASIC3.98□□□□□ -1.77
CFTRP13569 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.98□□□□□ -1.77
CFTRP13569 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.98□□□□□ -1.77
CFTRP13569 AC078899.5-201ENST00000612475 178 ntBASIC3.98□□□□□ -1.77
CFTRP13569 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.97□□□□□ -1.77
CFTRP13569 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CFTRP13569 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CFTRP13569 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.97□□□□□ -1.77
CFTRP13569 RNU1-87P-201ENST00000363727 170 ntBASIC3.97□□□□□ -1.77
CFTRP13569 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CFTRP13569 AC007677.1-201ENST00000445757 515 ntBASIC3.97□□□□□ -1.77
CFTRP13569 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.97□□□□□ -1.77
CFTRP13569 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.97□□□□□ -1.77
CFTRP13569 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.97□□□□□ -1.77
CFTRP13569 ADAM3A-203ENST00000461344 2157 ntBASIC3.97□□□□□ -1.77
CFTRP13569 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.97□□□□□ -1.77
CFTRP13569 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.97□□□□□ -1.77
CFTRP13569 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.97□□□□□ -1.77
CFTRP13569 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.97□□□□□ -1.77
CFTRP13569 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.97□□□□□ -1.77
CFTRP13569 AC004825.2-201ENST00000616634 455 ntBASIC3.97□□□□□ -1.77
CFTRP13569 AC011460.1-201ENST00000636268 1834 ntBASIC3.96□□□□□ -1.78
CFTRP13569 AC009487.4-201ENST00000624969 3585 ntBASIC3.96□□□□□ -1.78
CFTRP13569 Z99496.1-201ENST00000469424 1477 ntBASIC3.96□□□□□ -1.78
CFTRP13569 Y_RNA.226-201ENST00000364337 114 ntBASIC3.96□□□□□ -1.78
CFTRP13569 RNU1-91P-201ENST00000364746 163 ntBASIC3.96□□□□□ -1.78
CFTRP13569 RN7SKP32-201ENST00000410167 303 ntBASIC3.96□□□□□ -1.78
CFTRP13569 MORF4L1P6-201ENST00000418771 268 ntBASIC3.96□□□□□ -1.78
CFTRP13569 SETP10-201ENST00000424368 814 ntBASIC3.96□□□□□ -1.78
CFTRP13569 AL606490.7-201ENST00000433136 191 ntBASIC3.96□□□□□ -1.78
CFTRP13569 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CFTRP13569 RPL23AP42-201ENST00000471152 471 ntBASIC3.96□□□□□ -1.78
CFTRP13569 FAM172BP-201ENST00000487497 1089 ntBASIC3.96□□□□□ -1.78
CFTRP13569 OR7K1P-201ENST00000546439 926 ntBASIC3.96□□□□□ -1.78
CFTRP13569 OR11H5P-201ENST00000554039 926 ntBASIC3.96□□□□□ -1.78
CFTRP13569 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
CFTRP13569 RNU6-84P-201ENST00000607737 102 ntBASIC3.96□□□□□ -1.78
CFTRP13569 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.96□□□□□ -1.78
CFTRP13569 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.96□□□□□ -1.78
CFTRP13569 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CFTRP13569 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CFTRP13569 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CFTRP13569 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CFTRP13569 SNORA80E-201ENST00000384744 137 ntBASIC3.95□□□□□ -1.78
CFTRP13569 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CFTRP13569 RNU2-2P-201ENST00000410396 191 ntBASIC3.95□□□□□ -1.78
CFTRP13569 AL121882.1-201ENST00000422893 417 ntBASIC3.95□□□□□ -1.78
CFTRP13569 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.95□□□□□ -1.78
CFTRP13569 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms