Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 AP001094.1-201ENST00000579805 193 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC011471.1-201ENST00000585766 187 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 EIF1P6-201ENST00000600054 334 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC018714.1-201ENST00000605028 208 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC069545.1-201ENST00000605671 358 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AL139286.2-201ENST00000606838 396 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AC069209.1-201ENST00000619282 651 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC6P09630 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC6P09630 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HOXC6P09630 AL596275.2-204ENST00000641628 552 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 AL596275.2-206ENST00000641957 626 ntBASIC4.27□□□□□ -1.73
HOXC6P09630 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC6P09630 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HOXC6P09630 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
HOXC6P09630 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC6P09630 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC6P09630 AC092079.1-201ENST00000558620 1985 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXC6P09630 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC6P09630 MIR490-201ENST00000384865 128 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 TAF9BP1-201ENST00000396646 746 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXC6P09630 USP9YP31-201ENST00000431405 881 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 KCTD9P3-201ENST00000434597 1169 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXC6P09630 USP9YP22-201ENST00000438971 294 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXC6P09630 MTCO1P19-201ENST00000443487 500 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC6P09630 RBMY2UP-201ENST00000453474 324 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 RFC5P1-201ENST00000454419 874 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 RNU7-27P-201ENST00000459281 62 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 SETP11-201ENST00000473027 690 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 MTCO2P32-201ENST00000514865 403 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC6P09630 AC060788.1-201ENST00000521318 469 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC6P09630 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC6P09630 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC6P09630 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXC6P09630 GNRHR2P1-201ENST00000555315 631 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC022884.3-201ENST00000579571 248 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC233280.2-201ENST00000603917 1070 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC055764.2-201ENST00000610089 670 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC092656.1-203ENST00000624134 423 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXC6P09630 MIR3651-201ENST00000630427 90 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 AC119674.1-207ENST00000641355 633 ntBASIC4.26□□□□□ -1.73
HOXC6P09630 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC6P09630 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC6P09630 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 RNF6P1-201ENST00000444889 1784 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXC6P09630 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 RNU6-931P-201ENST00000363850 107 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 Y_RNA.553-201ENST00000384670 102 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 RNU2-42P-201ENST00000410697 113 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 Z92545.1-201ENST00000411782 234 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 RPL7P8-201ENST00000411964 730 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 AL049610.1-201ENST00000423374 372 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC6P09630 AC011742.1-201ENST00000431448 434 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 UBE2V1P5-201ENST00000440070 405 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC069285.2-201ENST00000440210 275 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXC6P09630 RPS17P13-201ENST00000448974 407 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC243772.1-201ENST00000451620 410 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 USP9YP10-201ENST00000454868 628 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC6P09630 RN7SL601P-201ENST00000471221 293 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXC6P09630 RPL32P34-201ENST00000486380 400 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 AC107401.1-201ENST00000503426 685 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC6P09630 AC109471.1-201ENST00000511631 612 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 USP9YP5-201ENST00000511770 630 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC109445.1-201ENST00000512356 383 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 HNRNPKP5-201ENST00000515300 253 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 Y_RNA.695-201ENST00000516715 107 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXC6P09630 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms