Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL1A2P08123 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.98□□□□□ -1.93
COL1A2P08123 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.98□□□□□ -1.93
COL1A2P08123 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.98□□□□□ -1.93
COL1A2P08123 AC083760.1-201ENST00000589621 670 ntBASIC2.98□□□□□ -1.93
COL1A2P08123 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.98□□□□□ -1.93
COL1A2P08123 AC026790.2-201ENST00000606282 430 ntBASIC2.98□□□□□ -1.93
COL1A2P08123 AP006248.3-201ENST00000623580 594 ntBASIC2.98□□□□□ -1.93
COL1A2P08123 AC106858.1-201ENST00000637497 429 ntBASIC2.98□□□□□ -1.93
COL1A2P08123 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.97□□□□□ -1.93
COL1A2P08123 RLIMP2-201ENST00000427891 1563 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 AL049780.3-201ENST00000624612 1583 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A2P08123 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A2P08123 ASNSP3-201ENST00000451989 1306 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A2P08123 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
COL1A2P08123 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.97□□□□□ -1.93
COL1A2P08123 AL672167.1-206ENST00000356293 943 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 RNU6-697P-201ENST00000363348 107 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 U3.12-201ENST00000364498 214 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 AL356057.3-201ENST00000402607 340 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A2P08123 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A2P08123 MTND2P9-201ENST00000422293 931 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 AC073464.3-201ENST00000422564 712 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 MTND4LP14-201ENST00000429447 288 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 UBE2V1P6-201ENST00000430840 422 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 RPL32P28-201ENST00000443577 397 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A2P08123 VN1R48P-201ENST00000448149 1036 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.97□□□□□ -1.93
COL1A2P08123 RPL23AP31-201ENST00000456160 467 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 RPS3P1-201ENST00000456781 192 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.97□□□□□ -1.93
COL1A2P08123 AC015908.1-201ENST00000478739 476 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A2P08123 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A2P08123 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A2P08123 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A2P08123 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A2P08123 AC092451.2-201ENST00000538746 658 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.97□□□□□ -1.93
COL1A2P08123 AC074029.2-201ENST00000551045 634 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A2P08123 BNIP3P39-201ENST00000601077 554 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A2P08123 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A2P08123 AC092435.3-201ENST00000565538 3654 ntBASIC2.97□□□□□ -1.93
COL1A2P08123 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
COL1A2P08123 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.96□□□□□ -1.94
COL1A2P08123 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL1A2P08123 GTF2H2B-203ENST00000508065 1432 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL1A2P08123 RPL9P7-201ENST00000330965 580 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
COL1A2P08123 RNU6-40P-201ENST00000384254 107 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AL356057.1-202ENST00000402263 756 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AC098592.2-201ENST00000413158 265 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.96□□□□□ -1.94
COL1A2P08123 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.96□□□□□ -1.94
COL1A2P08123 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.96□□□□□ -1.94
COL1A2P08123 RPL7P59-201ENST00000447700 943 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 PCNAP1-201ENST00000505363 709 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AC114781.4-201ENST00000513707 639 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 RNU6-491P-201ENST00000516099 110 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.96□□□□□ -1.94
COL1A2P08123 AC005776.1-201ENST00000603164 290 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AL049844.2-201ENST00000604280 628 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AC231759.1-201ENST00000616455 597 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 XIST_intron.1-201ENST00000619444 68 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 SNORA50A-202ENST00000629536 136 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AC000367.1-201ENST00000452711 1766 ntBASIC2.96□□□□□ -1.94
COL1A2P08123 AL359693.1-201ENST00000614959 2407 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A2P08123 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.95□□□□□ -1.94
COL1A2P08123 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.95□□□□□ -1.94
COL1A2P08123 AC138915.3-201ENST00000562908 1389 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL1A2P08123 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A2P08123 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A2P08123 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 MTND2P30-201ENST00000456663 382 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 AC126389.1-201ENST00000477436 290 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 AP001086.1-201ENST00000494882 321 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.95□□□□□ -1.94
COL1A2P08123 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A2P08123 RNU6-237P-201ENST00000515985 71 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 IGHV3-76-201ENST00000522465 295 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
COL1A2P08123 OR5D17P-201ENST00000531492 978 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.95□□□□□ -1.94
COL1A2P08123 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A2P08123 CKS1BP1-201ENST00000555221 240 ntBASIC2.95□□□□□ -1.94
COL1A2P08123 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.95□□□□□ -1.94
COL1A2P08123 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.95□□□□□ -1.94
COL1A2P08123 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.95□□□□□ -1.94
COL1A2P08123 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.95□□□□□ -1.94
COL1A2P08123 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms