Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 BNIP3P7-201ENST00000605641 516 ntBASIC3.07□□□□□ -1.92
APOEP02649 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.07□□□□□ -1.92
APOEP02649 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.07□□□□□ -1.92
APOEP02649 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.07□□□□□ -1.92
APOEP02649 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOEP02649 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.07□□□□□ -1.92
APOEP02649 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
APOEP02649 MTCO1P24-201ENST00000515438 1558 ntBASIC3.07□□□□□ -1.92
APOEP02649 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
APOEP02649 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.07□□□□□ -1.92
APOEP02649 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.06□□□□□ -1.92
APOEP02649 RNU6-525P-201ENST00000363685 104 ntBASIC3.06□□□□□ -1.92
APOEP02649 MIR421-201ENST00000365696 85 ntBASIC3.06□□□□□ -1.92
APOEP02649 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
APOEP02649 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOEP02649 RNU6-891P-201ENST00000384280 111 ntBASIC3.06□□□□□ -1.92
APOEP02649 RNU6-851P-201ENST00000384565 107 ntBASIC3.06□□□□□ -1.92
APOEP02649 UBA52P6-201ENST00000399822 382 ntBASIC3.06□□□□□ -1.92
APOEP02649 AL138880.1-201ENST00000405824 642 ntBASIC3.06□□□□□ -1.92
APOEP02649 AL353692.2-201ENST00000407054 335 ntBASIC3.06□□□□□ -1.92
APOEP02649 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.06□□□□□ -1.92
APOEP02649 RNU2-6P-201ENST00000411404 190 ntBASIC3.06□□□□□ -1.92
APOEP02649 AC023128.2-201ENST00000420880 1223 ntBASIC3.06□□□□□ -1.92
APOEP02649 AC092447.7-201ENST00000422212 1621 ntBASIC3.06□□□□□ -1.92
APOEP02649 AC109583.1-201ENST00000432156 268 ntBASIC3.06□□□□□ -1.92
APOEP02649 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOEP02649 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.06□□□□□ -1.92
APOEP02649 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
APOEP02649 AL513343.1-201ENST00000451818 792 ntBASIC3.06□□□□□ -1.92
APOEP02649 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.06□□□□□ -1.92
APOEP02649 AC011825.1-201ENST00000484967 388 ntBASIC3.06□□□□□ -1.92
APOEP02649 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
APOEP02649 PCNAP1-201ENST00000505363 709 ntBASIC3.06□□□□□ -1.92
APOEP02649 AC010374.2-201ENST00000512933 535 ntBASIC3.06□□□□□ -1.92
APOEP02649 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.06□□□□□ -1.92
APOEP02649 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.06□□□□□ -1.92
APOEP02649 AC010733.2-201ENST00000589496 5702 ntBASIC3.06□□□□□ -1.92
APOEP02649 AL359198.2-201ENST00000611836 194 ntBASIC3.06□□□□□ -1.92
APOEP02649 AC135507.2-201ENST00000612443 309 ntBASIC3.06□□□□□ -1.92
APOEP02649 AL035425.3-201ENST00000564206 4996 ntBASIC3.06□□□□□ -1.92
APOEP02649 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOEP02649 ZNF807-201ENST00000328088 1707 ntBASIC3.05□□□□□ -1.92
APOEP02649 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.05□□□□□ -1.92
APOEP02649 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
APOEP02649 SNORA51.2-201ENST00000364595 132 ntBASIC3.05□□□□□ -1.92
APOEP02649 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
APOEP02649 EEF1A1P41-201ENST00000414667 207 ntBASIC3.05□□□□□ -1.92
APOEP02649 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.05□□□□□ -1.92
APOEP02649 RPL7P52-201ENST00000449200 742 ntBASIC3.05□□□□□ -1.92
APOEP02649 RPL21P41-201ENST00000459863 264 ntBASIC3.05□□□□□ -1.92
APOEP02649 AL136126.1-201ENST00000473603 402 ntBASIC3.05□□□□□ -1.92
APOEP02649 RPS17P11-201ENST00000474297 293 ntBASIC3.05□□□□□ -1.92
APOEP02649 HMGN2P13-201ENST00000476476 274 ntBASIC3.05□□□□□ -1.92
APOEP02649 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.05□□□□□ -1.92
APOEP02649 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.05□□□□□ -1.92
APOEP02649 AC098799.2-201ENST00000509466 868 ntBASIC3.05□□□□□ -1.92
APOEP02649 AF279873.1-201ENST00000523393 313 ntBASIC3.05□□□□□ -1.92
APOEP02649 AC006116.7-201ENST00000590141 756 ntBASIC3.05□□□□□ -1.92
APOEP02649 AC015871.2-201ENST00000603605 948 ntBASIC3.05□□□□□ -1.92
APOEP02649 AL513477.2-201ENST00000607858 568 ntBASIC3.05□□□□□ -1.92
APOEP02649 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOEP02649 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.05□□□□□ -1.92
APOEP02649 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.05□□□□□ -1.92
APOEP02649 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
APOEP02649 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.05□□□□□ -1.92
APOEP02649 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.04□□□□□ -1.92
APOEP02649 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.04□□□□□ -1.92
APOEP02649 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOEP02649 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOEP02649 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.04□□□□□ -1.92
APOEP02649 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
APOEP02649 AC022031.1-201ENST00000585985 2593 ntBASIC3.04□□□□□ -1.92
APOEP02649 RNU6-335P-201ENST00000364563 113 ntBASIC3.04□□□□□ -1.92
APOEP02649 SNORA44-201ENST00000384584 132 ntBASIC3.04□□□□□ -1.92
APOEP02649 BTBD10P2-201ENST00000404779 676 ntBASIC3.04□□□□□ -1.92
APOEP02649 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.04□□□□□ -1.92
APOEP02649 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.04□□□□□ -1.92
APOEP02649 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.04□□□□□ -1.92
APOEP02649 Z85994.2-201ENST00000434327 452 ntBASIC3.04□□□□□ -1.92
APOEP02649 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.04□□□□□ -1.92
APOEP02649 RPL39P40-201ENST00000445481 146 ntBASIC3.04□□□□□ -1.92
APOEP02649 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.04□□□□□ -1.92
APOEP02649 OR6K1P-201ENST00000456766 971 ntBASIC3.04□□□□□ -1.92
APOEP02649 AC080014.1-201ENST00000496877 1201 ntBASIC3.04□□□□□ -1.92
APOEP02649 AC111000.2-201ENST00000507775 550 ntBASIC3.04□□□□□ -1.92
APOEP02649 FAM60DP-201ENST00000524174 632 ntBASIC3.04□□□□□ -1.92
APOEP02649 AC113192.3-201ENST00000529152 742 ntBASIC3.04□□□□□ -1.92
APOEP02649 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.04□□□□□ -1.92
APOEP02649 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOEP02649 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.04□□□□□ -1.92
APOEP02649 AC006023.2-201ENST00000609916 167 ntBASIC3.04□□□□□ -1.92
APOEP02649 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
APOEP02649 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.03□□□□□ -1.92
APOEP02649 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOEP02649 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOEP02649 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
APOEP02649 AC010385.1-201ENST00000412374 256 ntBASIC3.03□□□□□ -1.92
APOEP02649 RFESDP1-201ENST00000422350 461 ntBASIC3.03□□□□□ -1.92
APOEP02649 AC005517.2-201ENST00000424673 553 ntBASIC3.03□□□□□ -1.92
APOEP02649 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms