Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 DHFRP6-201ENST00000401776 268 ntBASIC4.23□□□□□ -1.73
RTN3O95197 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.23□□□□□ -1.73
RTN3O95197 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN3O95197 TPTE2P3-201ENST00000441562 1189 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.23□□□□□ -1.73
RTN3O95197 CDC27P1-201ENST00000445384 715 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.23□□□□□ -1.73
RTN3O95197 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN3O95197 ARPC3P5-201ENST00000448802 534 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AL445669.2-201ENST00000454425 421 ntBASIC4.23□□□□□ -1.73
RTN3O95197 VN1R105P-201ENST00000486595 910 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTN3O95197 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.23□□□□□ -1.73
RTN3O95197 AC017037.1-201ENST00000508460 471 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN3O95197 RNA5SP143-201ENST00000516936 115 ntBASIC4.23□□□□□ -1.73
RTN3O95197 RNU6-1231P-201ENST00000517185 103 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN3O95197 NARSP2-201ENST00000518524 679 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AP004371.1-201ENST00000525240 214 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.23□□□□□ -1.73
RTN3O95197 OR4P1P-201ENST00000530808 1136 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTN3O95197 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTN3O95197 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.23□□□□□ -1.73
RTN3O95197 CYCSP2-201ENST00000558168 301 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC106785.1-201ENST00000565935 262 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC120057.2-201ENST00000571520 271 ntBASIC4.23□□□□□ -1.73
RTN3O95197 MIR5186-201ENST00000577504 120 ntBASIC4.23□□□□□ -1.73
RTN3O95197 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.23□□□□□ -1.73
RTN3O95197 AC103881.1-201ENST00000603476 538 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC104662.1-201ENST00000604448 511 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC112220.3-201ENST00000605502 502 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC087683.2-201ENST00000611384 326 ntBASIC4.23□□□□□ -1.73
RTN3O95197 MIR486-1-201ENST00000612171 68 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC140725.3-201ENST00000616193 880 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.23□□□□□ -1.73
RTN3O95197 AC004009.2-201ENST00000623016 728 ntBASIC4.23□□□□□ -1.73
RTN3O95197 AC008785.1-201ENST00000624475 456 ntBASIC4.23□□□□□ -1.73
RTN3O95197 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN3O95197 MTND4P34-201ENST00000572715 1371 ntBASIC4.23□□□□□ -1.73
RTN3O95197 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTN3O95197 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.23□□□□□ -1.73
RTN3O95197 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTN3O95197 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTN3O95197 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTN3O95197 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN3O95197 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RTN3O95197 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN3O95197 AL356473.1-201ENST00000406203 1408 ntBASIC4.22□□□□□ -1.73
RTN3O95197 OR4G11P-202ENST00000642116 1414 ntBASIC4.22□□□□□ -1.73
RTN3O95197 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN3O95197 AC097714.1-201ENST00000511272 1647 ntBASIC4.22□□□□□ -1.73
RTN3O95197 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN3O95197 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RTN3O95197 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN3O95197 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTN3O95197 RNU6-1249P-201ENST00000363237 111 ntBASIC4.22□□□□□ -1.73
RTN3O95197 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN3O95197 SNORD51-201ENST00000384320 80 ntBASIC4.22□□□□□ -1.73
RTN3O95197 SNORA37-201ENST00000384504 129 ntBASIC4.22□□□□□ -1.73
RTN3O95197 MIR23B-201ENST00000384832 97 ntBASIC4.22□□□□□ -1.73
RTN3O95197 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTN3O95197 ATP5F1P4-201ENST00000397288 746 ntBASIC4.22□□□□□ -1.73
RTN3O95197 USP9YP33-201ENST00000412220 421 ntBASIC4.22□□□□□ -1.73
RTN3O95197 MTCYBP38-201ENST00000417160 1123 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AL953862.1-201ENST00000423016 168 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AC019178.2-201ENST00000423595 505 ntBASIC4.22□□□□□ -1.73
RTN3O95197 RPL7P2-201ENST00000427639 268 ntBASIC4.22□□□□□ -1.73
RTN3O95197 HIGD1AP4-201ENST00000430194 280 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.22□□□□□ -1.73
RTN3O95197 USP9YP35-201ENST00000435696 412 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AL356535.1-201ENST00000440335 398 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.22□□□□□ -1.73
RTN3O95197 RSL24D1P3-201ENST00000449255 495 ntBASIC4.22□□□□□ -1.73
RTN3O95197 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN3O95197 MTCO3P11-201ENST00000455103 774 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AL136097.1-201ENST00000456945 913 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AC005921.1-201ENST00000510589 286 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AC022861.1-201ENST00000522981 663 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.22□□□□□ -1.73
RTN3O95197 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.22□□□□□ -1.73
RTN3O95197 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.22□□□□□ -1.73
RTN3O95197 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN3O95197 AL592436.1-201ENST00000605135 558 ntBASIC4.22□□□□□ -1.73
RTN3O95197 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.22□□□□□ -1.73
RTN3O95197 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTN3O95197 AC091925.2-201ENST00000625059 256 ntBASIC4.22□□□□□ -1.73
RTN3O95197 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN3O95197 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTN3O95197 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTN3O95197 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.21□□□□□ -1.73
RTN3O95197 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.21□□□□□ -1.73
RTN3O95197 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN3O95197 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN3O95197 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN3O95197 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN3O95197 SNORA7.2-201ENST00000364446 145 ntBASIC4.21□□□□□ -1.74
RTN3O95197 MIR1251-201ENST00000408552 70 ntBASIC4.21□□□□□ -1.74
RTN3O95197 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms