Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SCARNA10-201ENST00000459255 330 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 SNORA59A-201ENST00000459326 152 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 AC104563.1-201ENST00000476147 376 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 HMGN1P12-201ENST00000499125 195 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIN3BO60391 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.8□□□□□ -1.48
GRIN3BO60391 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIN3BO60391 AP000859.1-201ENST00000525536 307 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.8□□□□□ -1.48
GRIN3BO60391 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIN3BO60391 AL359212.1-201ENST00000556608 614 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 LARP7P2-201ENST00000575306 125 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.8□□□□□ -1.48
GRIN3BO60391 AC011468.4-201ENST00000603942 409 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.8□□□□□ -1.48
GRIN3BO60391 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.8□□□□□ -1.48
GRIN3BO60391 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.8□□□□□ -1.48
GRIN3BO60391 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIN3BO60391 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
GRIN3BO60391 AC009268.2-201ENST00000621925 457 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 AP006248.2-201ENST00000623309 592 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 AC139792.3-201ENST00000623525 224 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.8□□□□□ -1.48
GRIN3BO60391 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GRIN3BO60391 AC125257.1-201ENST00000560400 2930 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 ERCC6-202ENST00000374127 1782 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
GRIN3BO60391 MFSD8-242ENST00000641690 4199 ntBASIC5.8□□□□□ -1.48
GRIN3BO60391 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
GRIN3BO60391 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
GRIN3BO60391 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GRIN3BO60391 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
GRIN3BO60391 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AC008758.3-201ENST00000507003 1829 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 MAPK10-328ENST00000641553 4009 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GRIN3BO60391 Y_RNA.46-201ENST00000362695 102 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 Y_RNA.263-201ENST00000364659 114 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 ARF4P3-201ENST00000397387 509 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 DSTNP4-201ENST00000399472 474 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 EIF5P1-201ENST00000400019 1231 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 AL356776.1-201ENST00000406574 447 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.79□□□□□ -1.48
GRIN3BO60391 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.79□□□□□ -1.48
GRIN3BO60391 SNRPEP10-201ENST00000420249 274 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 AL117339.2-201ENST00000430475 180 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AL450023.3-201ENST00000440592 271 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 RPS26P56-201ENST00000444468 240 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 AC090804.1-201ENST00000448870 490 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 RPL7P49-201ENST00000471402 708 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AC034222.1-201ENST00000494052 532 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 AC018710.1-201ENST00000506509 158 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.79□□□□□ -1.48
GRIN3BO60391 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.79□□□□□ -1.48
GRIN3BO60391 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.79□□□□□ -1.48
GRIN3BO60391 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.79□□□□□ -1.48
GRIN3BO60391 AL732618.1-201ENST00000623251 301 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 U3.53-201ENST00000628922 216 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 MIR3662-201ENST00000637030 95 ntBASIC5.79□□□□□ -1.48
GRIN3BO60391 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GRIN3BO60391 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.79□□□□□ -1.48
GRIN3BO60391 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GRIN3BO60391 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
GRIN3BO60391 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.79□□□□□ -1.48
GRIN3BO60391 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
GRIN3BO60391 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
GRIN3BO60391 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.78□□□□□ -1.48
GRIN3BO60391 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
GRIN3BO60391 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
GRIN3BO60391 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
GRIN3BO60391 RNA5SP513-201ENST00000364648 118 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 Y_RNA.279-201ENST00000364763 95 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
GRIN3BO60391 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
GRIN3BO60391 MIR634-201ENST00000385208 97 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 Z98745.1-201ENST00000402553 494 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 AL023807.1-201ENST00000407932 359 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AL645608.4-201ENST00000423619 154 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 AL353777.1-201ENST00000425552 326 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AC002381.1-201ENST00000447049 280 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 AC245028.2-201ENST00000458673 253 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AC018797.3-201ENST00000513388 1241 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 RNU6-1281P-201ENST00000516223 105 ntBASIC5.78□□□□□ -1.48
GRIN3BO60391 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIN3BO60391 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms