Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SOX1O00570 RNU6-308P-201ENST00000390957 107 ntBASIC5.65□□□□□ -1.5
SOX1O00570 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX1O00570 ELOCP19-201ENST00000411919 318 ntBASIC5.65□□□□□ -1.5
SOX1O00570 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX1O00570 RPL23AP1-201ENST00000428990 471 ntBASIC5.65□□□□□ -1.5
SOX1O00570 RPS27AP12-201ENST00000429552 465 ntBASIC5.65□□□□□ -1.5
SOX1O00570 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.65□□□□□ -1.5
SOX1O00570 AL596266.1-201ENST00000448132 400 ntBASIC5.65□□□□□ -1.5
SOX1O00570 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX1O00570 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX1O00570 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX1O00570 RNU6-123P-201ENST00000516163 102 ntBASIC5.65□□□□□ -1.5
SOX1O00570 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.65□□□□□ -1.5
SOX1O00570 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX1O00570 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX1O00570 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX1O00570 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.65□□□□□ -1.5
SOX1O00570 AC090615.1-201ENST00000577519 154 ntBASIC5.65□□□□□ -1.5
SOX1O00570 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX1O00570 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX1O00570 AL355598.1-201ENST00000604169 202 ntBASIC5.65□□□□□ -1.5
SOX1O00570 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SOX1O00570 AC000123.2-201ENST00000623124 461 ntBASIC5.65□□□□□ -1.5
SOX1O00570 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX1O00570 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX1O00570 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SOX1O00570 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX1O00570 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX1O00570 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.65□□□□□ -1.51
SOX1O00570 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX1O00570 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX1O00570 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX1O00570 MTCO1P7-201ENST00000419523 1542 ntBASIC5.64□□□□□ -1.51
SOX1O00570 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX1O00570 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX1O00570 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX1O00570 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX1O00570 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX1O00570 U3.3-201ENST00000362986 216 ntBASIC5.64□□□□□ -1.51
SOX1O00570 Y_RNA.112-201ENST00000363250 102 ntBASIC5.64□□□□□ -1.51
SOX1O00570 MIR548F5-201ENST00000408421 86 ntBASIC5.64□□□□□ -1.51
SOX1O00570 RNU6-370P-201ENST00000411008 104 ntBASIC5.64□□□□□ -1.51
SOX1O00570 RPL37P10-201ENST00000412884 288 ntBASIC5.64□□□□□ -1.51
SOX1O00570 RPSAP35-201ENST00000413753 818 ntBASIC5.64□□□□□ -1.51
SOX1O00570 OR6C66P-201ENST00000414917 930 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AC007562.1-201ENST00000421819 517 ntBASIC5.64□□□□□ -1.51
SOX1O00570 MTCYBP9-201ENST00000431021 303 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX1O00570 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX1O00570 ATP5LP5-201ENST00000483050 299 ntBASIC5.64□□□□□ -1.51
SOX1O00570 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 AC005726.1-201ENST00000494679 427 ntBASIC5.64□□□□□ -1.51
SOX1O00570 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX1O00570 PTP4A1P4-201ENST00000512479 322 ntBASIC5.64□□□□□ -1.51
SOX1O00570 RPL39P5-202ENST00000512505 151 ntBASIC5.64□□□□□ -1.51
SOX1O00570 RN7SKP260-201ENST00000516907 149 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX1O00570 AP001804.3-201ENST00000525146 880 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AP003122.3-201ENST00000526316 255 ntBASIC5.64□□□□□ -1.51
SOX1O00570 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX1O00570 AC103843.2-201ENST00000530523 682 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX1O00570 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX1O00570 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.64□□□□□ -1.51
SOX1O00570 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX1O00570 MIR4775-201ENST00000581168 75 ntBASIC5.64□□□□□ -1.51
SOX1O00570 MIR4424-201ENST00000585257 86 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AC011477.5-201ENST00000586571 259 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 AL592436.1-201ENST00000605135 558 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 AC244100.1-202ENST00000621554 382 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX1O00570 AC009902.3-201ENST00000606235 2172 ntBASIC5.64□□□□□ -1.51
SOX1O00570 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX1O00570 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX1O00570 AC011933.2-201ENST00000578539 2790 ntBASIC5.64□□□□□ -1.51
SOX1O00570 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX1O00570 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX1O00570 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX1O00570 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SOX1O00570 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX1O00570 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
SOX1O00570 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SOX1O00570 MTND5P10-201ENST00000603719 1809 ntBASIC5.63□□□□□ -1.51
SOX1O00570 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX1O00570 RNA5SP258-201ENST00000362750 119 ntBASIC5.63□□□□□ -1.51
SOX1O00570 RN7SKP145-201ENST00000363291 303 ntBASIC5.63□□□□□ -1.51
SOX1O00570 RN7SKP158-201ENST00000410453 326 ntBASIC5.63□□□□□ -1.51
SOX1O00570 RNU6-1304P-201ENST00000411374 106 ntBASIC5.63□□□□□ -1.51
SOX1O00570 MED13P1-201ENST00000428342 171 ntBASIC5.63□□□□□ -1.51
SOX1O00570 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms