Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC006445.1-201ENST00000491925 405 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC016550.1-201ENST00000505348 785 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 EIF4BP1-201ENST00000554881 351 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC093510.2-201ENST00000562820 896 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 BNIP3P39-201ENST00000601077 554 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 BNIP3P31-201ENST00000604515 566 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC090525.3-201ENST00000605601 189 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNA5SP108-201ENST00000605921 117 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC090425.2-201ENST00000608818 501 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC245100.7-201ENST00000609678 442 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC093875.1-201ENST00000623688 504 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC018692.3-201ENST00000623929 123 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 SNORA50A-202ENST00000629536 136 ntBASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TMX2-CTNND1H3BSU7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC110774.1-201ENST00000623567 2018 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC021755.1-201ENST00000559747 1447 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR1S2-201ENST00000302592 978 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 SNORA31-201ENST00000362607 130 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNA5SP197-201ENST00000363357 119 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 MIR142-201ENST00000384835 87 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 VTA1P1-201ENST00000414044 866 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 PRELID3BP11-201ENST00000414230 479 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL353705.1-201ENST00000433468 480 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 HMGB3P11-201ENST00000440127 604 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC093801.2-201ENST00000503966 1050 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNU5A-7P-201ENST00000515979 116 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC022080.3-201ENST00000544433 482 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC023825.1-201ENST00000566704 1030 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC122134.1-202ENST00000569111 1201 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC144521.1-201ENST00000607148 956 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL049777.1-201ENST00000622740 518 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC026422.1-201ENST00000623961 452 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 MIR622-201ENST00000638396 96 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 ZNF807-201ENST00000328088 1707 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC008264.2-201ENST00000610193 3731 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL355143.1-201ENST00000407101 841 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 RNU2-6P-201ENST00000411404 190 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL356968.1-201ENST00000416622 474 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 SDCBPP3-201ENST00000419629 891 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC013262.1-201ENST00000426710 252 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 KCTD9P5-201ENST00000504141 1170 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC005921.1-201ENST00000510589 286 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 PTGES3P3-201ENST00000511479 482 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC104115.2-201ENST00000523026 687 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC068339.2-201ENST00000534395 618 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 MTATP6P2-201ENST00000603319 678 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 AC018754.1-201ENST00000607486 925 ntBASIC3.11□□□□□ -1.91
TMX2-CTNND1H3BSU7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms