Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 SNORD1C-201ENST00000363315 78 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 SNORA71.2-201ENST00000364941 134 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 Y_RNA.554-201ENST00000384672 102 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 USP9YP36-201ENST00000424581 829 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC006548.1-201ENST00000427470 102 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL445584.1-201ENST00000431451 330 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC000111.3-201ENST00000433478 193 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 ELOCP18-201ENST00000434209 337 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 ARPC3P1-201ENST00000437218 533 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 RPL21P89-201ENST00000444021 467 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 RPL29P29-201ENST00000448725 423 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 MTND1P9-201ENST00000453775 944 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL445687.2-201ENST00000458156 728 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 MTAPP1-201ENST00000489154 819 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 RNU6-27P-201ENST00000516146 107 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 SETP7-201ENST00000552169 453 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL390334.1-201ENST00000556395 450 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL356432.3-201ENST00000568952 465 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL139286.1-201ENST00000604465 483 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL356321.1-201ENST00000621360 228 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC079597.1-201ENST00000624306 508 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC068880.5-201ENST00000624331 290 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 CR381572.1-201ENST00000625098 102 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC011504.1-201ENST00000623331 4103 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AL442639.1-201ENST00000625030 1899 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 MIR383-201ENST00000362257 73 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 RNA5SP119-201ENST00000362715 117 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 RNA5SP22-201ENST00000365393 109 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 MIR218-2-201ENST00000385006 110 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 MTCO3P40-201ENST00000392516 676 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 BX295541.1-201ENST00000417774 250 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC005517.2-201ENST00000424673 553 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 ISCA1P6-201ENST00000427740 390 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 MTND6P18-201ENST00000439477 513 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AL162151.2-201ENST00000448875 158 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 MTCO3P38-201ENST00000468910 766 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 PTGES3P3-201ENST00000511479 482 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 snoU109.5-201ENST00000516231 132 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 RNU6-314P-201ENST00000516574 104 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AL133241.1-201ENST00000556832 487 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC107954.1-201ENST00000565906 727 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 SNORA59B-202ENST00000578183 701 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 MIR3118-1-201ENST00000581787 76 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC121334.2-201ENST00000605387 271 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC011816.2-201ENST00000607089 556 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 AC092954.2-201ENST00000609103 430 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 ELF2P3-201ENST00000445099 1506 ntBASIC5.36□□□□□ -1.55
CCDC85CA6NKD9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms