Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC090617.7-201ENST00000623952 126 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 U8.9-201ENST00000365667 134 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 KRR1P1-201ENST00000419430 803 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AL031663.1-201ENST00000437445 219 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 RPS24P13-201ENST00000442520 397 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AC080014.1-201ENST00000496877 1201 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AC026412.2-201ENST00000512270 1075 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 RNU4-18P-201ENST00000516751 149 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 MTCYBP41-201ENST00000528913 1123 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AL157394.1-201ENST00000562983 1224 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AC078899.3-201ENST00000599065 212 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 AL627309.6-201ENST00000606857 840 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
TRAV27A0A087WT01 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 MIR208A-201ENST00000362287 71 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 EIF5P1-201ENST00000400019 1231 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AL139281.1-201ENST00000422120 335 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 RPL17P49-201ENST00000443728 411 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AC008571.1-201ENST00000467232 300 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AC093663.2-201ENST00000484625 313 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 HMGB1P3-201ENST00000502802 616 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 TBCAP3-201ENST00000512475 312 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 RNU6-56P-201ENST00000516986 93 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 RNU6-711P-201ENST00000517255 106 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 CKS1BP7-201ENST00000522230 235 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AP003102.1-201ENST00000525638 661 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AC113192.3-201ENST00000529152 742 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AC115085.1-201ENST00000588924 229 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AC131902.3-201ENST00000611767 581 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 AL359198.2-201ENST00000611836 194 ntBASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.36□□□□□ -2.03
TRAV27A0A087WT01 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 USP9YP20-201ENST00000419224 558 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 RFESDP1-201ENST00000422350 461 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 RPL21P2-201ENST00000440049 481 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AC011816.1-201ENST00000441346 546 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 MTND2P8-201ENST00000450555 1025 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AL590639.1-201ENST00000456484 337 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 RPL31P53-201ENST00000457065 348 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 RPL5P24-201ENST00000463742 885 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 SRIP1-201ENST00000489235 288 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 RNU6-826P-201ENST00000516827 104 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 OR2BH1P-201ENST00000608850 864 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 MAPK10-322ENST00000641485 4530 ntBASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRAV27A0A087WT01 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 FAM35BP-202ENST00000497389 3337 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 RNU6-335P-201ENST00000364563 113 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms