Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC016712.1-201ENST00000431088 378 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AL731563.1-201ENST00000442202 214 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 FABP5P13-201ENST00000452144 328 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AL445665.1-202ENST00000452436 324 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC058823.1-201ENST00000485315 474 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 SNORA70.11-201ENST00000515987 138 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 SNORA70.13-201ENST00000516116 138 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 Y_RNA.667-201ENST00000516212 107 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 RNU6-794P-201ENST00000517261 64 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC090022.1-201ENST00000546569 311 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC092121.1-201ENST00000569452 202 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC010653.1-201ENST00000571108 881 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 RPL23AP84-201ENST00000571193 464 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 COX6CP7-201ENST00000597056 208 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AL034351.1-201ENST00000605288 668 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AL359547.2-201ENST00000615810 418 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 MIR4275-201ENST00000636486 87 ntBASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
FOXD3Q9UJU5 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXD3Q9UJU5 AL353796.1-201ENST00000561542 3241 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 RNA5SP273-201ENST00000362484 113 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 RNU6-890P-201ENST00000384121 107 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 NDUFS5P1-201ENST00000405668 289 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AC092447.6-201ENST00000414578 210 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 E2F6P2-201ENST00000420708 748 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 RPS27AP12-201ENST00000429552 465 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 HMGB3P24-201ENST00000433260 622 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AL161636.2-201ENST00000445179 927 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 GEMIN8P3-201ENST00000445417 720 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 NDUFB5P1-201ENST00000508134 564 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AC017037.1-201ENST00000508460 471 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 RNU2-69P-201ENST00000516061 100 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 RNU6-1213P-201ENST00000517075 94 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 RNU1-54P-201ENST00000517181 120 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 CYCSP27-201ENST00000527643 293 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 DYNLL1P4-201ENST00000549314 266 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AC110588.1-201ENST00000559699 137 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AC119403.2-201ENST00000590960 598 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AL031320.1-201ENST00000604177 357 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AC011890.2-201ENST00000613393 294 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 MIR6128-201ENST00000615528 109 ntBASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
FOXD3Q9UJU5 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 PNPT1P2-201ENST00000456768 2050 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms