Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 ELL2P4-201ENST00000446870 1376 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 Y_RNA.25-201ENST00000362528 102 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RNU6-1243P-201ENST00000364028 107 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RNU6-534P-201ENST00000364877 106 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 Y_RNA.598-201ENST00000410480 95 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RN7SKP213-201ENST00000410746 298 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AL591848.1-201ENST00000413092 322 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 BX295541.1-201ENST00000417774 250 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC008280.1-201ENST00000418851 412 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 USP9YP36-201ENST00000424581 829 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RPL37P21-201ENST00000435890 276 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 LSM1P1-201ENST00000438629 273 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 MTND4LP16-201ENST00000440828 295 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC010733.1-201ENST00000451515 401 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 FABP3P2-201ENST00000453169 399 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 HMGB3P30-201ENST00000457863 606 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RPSAP50-201ENST00000481955 852 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RNF138P1-201ENST00000502765 546 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 SCARNA22-201ENST00000503991 125 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC025674.1-201ENST00000507074 324 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 BTF3P13-201ENST00000513224 490 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC006499.2-201ENST00000513470 337 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC046134.1-201ENST00000514454 666 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 Vault.1-201ENST00000516474 102 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RNU6-1153P-201ENST00000516760 105 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RNU4-60P-201ENST00000517239 135 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AP003122.4-201ENST00000530980 758 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC137800.2-201ENST00000574375 120 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 RN7SL176P-201ENST00000580352 264 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC011487.3-201ENST00000593607 453 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC005255.1-201ENST00000593748 216 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC112191.3-201ENST00000604371 277 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AL035413.2-201ENST00000604801 525 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AL049634.3-201ENST00000604968 457 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AL365503.1-201ENST00000605247 905 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC008536.2-201ENST00000607284 349 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 AC097468.3-201ENST00000607956 456 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 INTS6P1-201ENST00000504674 2530 ntBASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.2□□□□□ -1.74
NRIP3Q9NQ35 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 MTND4P12-201ENST00000498999 1377 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 XIAPP3-201ENST00000312918 795 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 RNU6-462P-201ENST00000362659 105 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 RNA5SP123-201ENST00000363244 119 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 SNORA74A-201ENST00000364089 198 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 RNU6-444P-201ENST00000383988 108 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 EIF5P1-201ENST00000400019 1231 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 SNORA11.3-201ENST00000408471 128 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 RPL31P2-201ENST00000413849 377 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 RPS3AP9-201ENST00000417027 792 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 PDSS1P1-201ENST00000422953 1114 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 MTCO2P11-201ENST00000431069 680 ntBASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.19□□□□□ -1.74
NRIP3Q9NQ35 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms