Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 CAB39P1-201ENST00000502277 460 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC093767.1-201ENST00000504523 156 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 HMGB3P15-201ENST00000507326 574 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 SNORA31.20-201ENST00000517111 133 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC107934.2-201ENST00000518653 310 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 DEFB130C-202ENST00000530001 230 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC004024.1-201ENST00000549244 247 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC090502.2-201ENST00000549267 280 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC084824.1-201ENST00000550917 1005 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 RN7SL703P-201ENST00000578485 302 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 MIR5708-201ENST00000579723 85 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC053481.4-201ENST00000583164 216 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC091946.2-201ENST00000606105 291 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC006329.2-201ENST00000611491 394 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AC018816.2-201ENST00000621460 353 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 U6.98-201ENST00000637157 84 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 AF127577.6-201ENST00000623352 2191 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 ZNF542P-204ENST00000482727 1305 ntBASIC3.6□□□□□ -1.83
DDX47Q9H0S4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX47Q9H0S4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 SNORD9-201ENST00000362566 104 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 RNU6-1000P-201ENST00000391066 106 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 RN7SKP156-201ENST00000410308 342 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 LUZP4P1-201ENST00000415420 344 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AL356968.1-201ENST00000416622 474 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 GTF2IP23-201ENST00000423746 351 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 MTCO1P3-201ENST00000429327 192 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 snoU13.24-201ENST00000458998 104 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 PLGLA-201ENST00000465668 449 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC010285.1-201ENST00000470580 392 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 VN1R17P-201ENST00000472048 1090 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 RN7SL132P-201ENST00000478131 296 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 RN7SKP289-201ENST00000517244 295 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 MED28P5-201ENST00000528254 438 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC022916.3-201ENST00000592961 742 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 XIAPP1-201ENST00000603162 600 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC006254.3-201ENST00000603353 884 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC011816.2-201ENST00000607089 556 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AL590282.1-201ENST00000610379 1136 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC006963.1-201ENST00000624003 1052 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AC010872.1-201ENST00000624225 675 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 AP003485.1-201ENST00000625093 753 ntBASIC3.59□□□□□ -1.83
DDX47Q9H0S4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
DDX47Q9H0S4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
DDX47Q9H0S4 AC032011.1-201ENST00000611703 1549 ntBASIC3.59□□□□□ -1.84
DDX47Q9H0S4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
DDX47Q9H0S4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 ZNF826P-207ENST00000622273 1910 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 RNA5SP51-201ENST00000364750 119 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 SNORD65.1-201ENST00000390889 71 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 Y_RNA.578-201ENST00000390903 88 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 RNU2-28P-201ENST00000410457 189 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 MTND4P3-201ENST00000417829 541 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AIMP1P1-201ENST00000418670 937 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 DPRXP1-201ENST00000426312 460 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 RPL21P66-201ENST00000426566 466 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC093155.1-201ENST00000440164 826 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC079776.3-201ENST00000450665 370 ntBASIC3.58□□□□□ -1.84
DDX47Q9H0S4 AC097262.1-201ENST00000452559 548 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms