Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
UPF3BQ9BZI7 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 MIR181B1-201ENST00000385240 110 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 HMGB1P10-201ENST00000395823 563 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AL590290.1-201ENST00000405336 380 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AP000567.1-201ENST00000406413 156 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC004987.3-201ENST00000413879 771 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 NDUFA5P10-201ENST00000432147 357 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 OR2B8P-201ENST00000432841 938 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 BX276092.4-201ENST00000452056 248 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 HMGN1P8-201ENST00000463578 288 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC006483.1-201ENST00000487308 313 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 MTND4LP22-201ENST00000508209 276 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC017037.2-201ENST00000513850 890 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC067904.2-201ENST00000517322 1283 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AL121603.1-201ENST00000553815 142 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC055876.1-202ENST00000567053 138 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC015871.2-201ENST00000603605 948 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 AC117529.2-201ENST00000512159 2068 ntBASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UPF3BQ9BZI7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 SNORA51.4-201ENST00000364993 124 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 RNU6-244P-201ENST00000391028 104 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 RN7SKP58-201ENST00000411010 305 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 EI24P1-201ENST00000416584 867 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 RPS29P6-201ENST00000438196 145 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC009812.2-201ENST00000517657 457 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 OR8L1P-201ENST00000534005 955 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC074029.1-201ENST00000552531 1044 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 KC877982.1-201ENST00000602313 470 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC007566.2-201ENST00000603642 413 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC090525.3-201ENST00000605601 189 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AP003485.2-201ENST00000623636 610 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC092184.1-201ENST00000625042 715 ntBASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
UPF3BQ9BZI7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 RNU6-31P-201ENST00000384388 108 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC105402.1-201ENST00000413336 545 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 SDCBPP3-201ENST00000419629 891 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 MTND2P16-201ENST00000419987 799 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AL445528.1-201ENST00000426330 420 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 RPS27P5-201ENST00000444247 244 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 NPM1P49-201ENST00000448027 714 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AL162389.1-201ENST00000449233 177 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 VN1R104P-201ENST00000505115 1009 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 TMEM248P1-201ENST00000510579 951 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 RN7SKP272-201ENST00000516988 232 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC022616.2-201ENST00000523185 300 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 OR5G4P-201ENST00000525251 760 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 PSMA2P1-201ENST00000526365 646 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AL049870.4-201ENST00000555741 486 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC103881.1-201ENST00000603476 538 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC011468.4-201ENST00000603942 409 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 BNIP3P10-201ENST00000605360 577 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC009039.2-201ENST00000624524 529 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
UPF3BQ9BZI7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 MTND4P31-201ENST00000425607 1343 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AP003122.5-201ENST00000527668 3766 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 MIR181A2-201ENST00000384863 110 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 BMS1P22-201ENST00000414726 313 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms