Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TRMT112P4-201ENST00000429016 379 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 FTH1P12-201ENST00000432137 551 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 NDUFB1P1-201ENST00000435191 180 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC244670.1-201ENST00000436879 112 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RPEP4-201ENST00000437636 602 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CYCSP12-201ENST00000437729 300 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AP000936.3-201ENST00000438127 255 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC010655.1-201ENST00000449336 292 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RPSAP64-201ENST00000451820 336 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TRBV26-201ENST00000456572 344 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RN7SL566P-201ENST00000467650 296 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RN7SL144P-201ENST00000475761 295 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL591122.1-201ENST00000487348 492 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RN7SL580P-201ENST00000492489 287 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC104164.2-201ENST00000496953 495 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC135721.1-201ENST00000497954 479 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MRPL49P1-201ENST00000505951 535 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 KRTAP9-12P-201ENST00000514388 532 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RNA5SP154-201ENST00000516193 111 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 IGHVII-49-1-201ENST00000521760 224 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC084251.1-201ENST00000521867 382 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TDGF1P5-201ENST00000523009 453 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AP004607.5-201ENST00000532034 217 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC091078.2-201ENST00000557145 559 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC015818.5-201ENST00000578659 356 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR548X-201ENST00000580069 75 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR3187-201ENST00000583431 70 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC234771.5-201ENST00000600161 514 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC069307.1-201ENST00000602820 447 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CR382285.1-202ENST00000604687 547 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL356458.1-201ENST00000604764 465 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SRGAP2D-201ENST00000605551 1021 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL353149.1-201ENST00000610667 244 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SNCA-212ENST00000611107 297 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL022345.3-201ENST00000611406 228 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL080285.2-201ENST00000612765 458 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 BSNDP1-201ENST00000613026 367 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 U2.20-201ENST00000613956 192 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC009053.4-201ENST00000614366 108 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR6737-201ENST00000617385 70 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC099518.6-201ENST00000617407 450 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR7113-201ENST00000621222 59 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SMCR2_1.1-201ENST00000621493 157 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC090617.7-201ENST00000623952 126 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 BCAS3-233ENST00000626960 227 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC095038.3-201ENST00000634439 195 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL591848.3-201ENST00000570141 2968 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 TARS2P1-201ENST00000506124 2041 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms